NDB ID: 5V1F    PDB ID: 5V1F 

Title:

DNA POLYMERASE BETA SUBSTRATE COMPLEX WITH 8-OXOG AT THE PRIMER TERMINUS AND INCOMING DCTP

Molecular Description:

DNA polymerase beta/DNA Complex

Structural Keywords:

B DOUBLE HELIX

Nucleic Acid Sequence:

Click to show/hide 3 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Whitaker, A.M., Smith, M.R., Schaich, M.A., Freudenthal, B.D.
Capturing a mammalian DNA polymerase extending from an oxidized nucleotide. 
Nucleic Acids Res., , pp. - , 2017.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 1 21 1

Cell Constants:

a = 50.218   b = 79.016   c = 55.626 (Ångstroms)

α = 90.0   β = 107.01   γ = 90.0 (degrees)

Refinement:

The structure was refined using the PHENIX (1.10_2155: ???) program. The R value is 0.2329 for 36996 reflections in the resolution range 25.405 to 2.181 Ångstroms with Fobs >  1.34 sigma(Fobs) and with I >  0.0 sigma(I)

Download Data:

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format) 1

Structure Factors (cif format)

Coordinates (pdb format, Unix compressed(.gz))

Coordinates (cif format, Unix compressed(.gz))

NMR Restraints (cif format, Unix compressed(.gz))

XML | Complete with coordinates (xml format, GNU compressed(.gz))

XML | Coordinates only (xml format, GNU compressed(.gz))

XML | Header only (xml format, GNU compressed(.gz))