A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 6AQV  PDB ID: 6AQV 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11AA_DC101DG102:DC211DG212_BB0.1695.5283.581-0.743-0.353-8.797-34.928-0.9193.82.292-4.828-8.835
13AA_DC103DG104:DC209DG210_BB0.0335.4953.6050.2210.162-8.937-35.6590.7733.503-1.0411.42-8.941
15AA_DC105DG106:DC207DG208_BB0.2525.5473.642-0.238-0.723-8.302-35.840.9754.1144.984-1.638-8.336
12AA_DG102DC103:DG210DC211_BB0.119-1.1193.2180.519-4.718-50.521.6280.1753.1075.5140.607-50.727
14AA_DG104DC105:DG208DC209_BB0.14-0.8993.228-0.16-2.642-51.0241.2220.1513.1813.065-0.186-51.088
16CC_DC301DG302:DC411DG412_DD-0.0115.3953.6351.0890.092-8.095-38.1573.2923.544-0.6457.667-8.168
18CC_DC303DG304:DC409DG410_DD-0.1735.5223.761-2.3854.635-8.889-36.777-4.0610.727-27.058-13.922-10.301
110CC_DC305DG306:DC407DG408_DD0.1695.2333.41-3.886-0.708-7.48-33.393-10.3133.5314.993-27.415-8.458
17CC_DG302DC303:DG410DC411_DD0.127-0.9253.114-0.558-5.208-50.0831.4370.1123.0116.132-0.657-50.339
19CC_DG304DC305:DG408DC409_DD0.028-0.8513.2851.988-5.79-49.7461.4190.1753.1716.8532.353-50.097
111EE_DC501DG502:DC611DG612_FF0.1055.5573.68-0.9422.153-10.114-34.256-0.972.445-12.001-5.251-10.383
113EE_DC503DG504:DC609DG610_FF-0.0715.3273.781-3.2080.493-8.202-35.951-8.9913.194-3.282-21.359-8.82
115EE_DC505DG506:DC607DG608_FF-0.0595.4673.626-4.1496.494-7.702-34.157-3.731-0.711-37.988-24.272-10.891
112EE_DG502DC503:DG610DC611_FF-0.202-1.0073.2091.563-3.153-48.5821.456-0.1293.1473.8261.896-48.702
114EE_DG504DC505:DG608DC609_FF0.202-1.0823.3440.041-4.203-50.6831.5570.2383.2514.90.048-50.846

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.