A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 15-Nov-2017 number of released structures: 9208
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NDB ID: 6AQT  PDB ID: 6AQT 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11AA_DC101DG102:DC211DG212_BB-0.0515.4763.6241.412-0.575-11.092-27.0782.1693.8772.9587.262-11.196
13AA_DC103DG104:DC209DG210_BB-0.0275.5363.615-0.46-0.038-10.455-30.278-1.0213.6310.209-2.525-10.466
15AA_DC105DG106:DC207DG208_BB-0.0695.4783.5920.549-0.663-9.271-32.0860.9463.974.0923.387-9.311
12AA_DG102DC103:DG210DC211_BB-0.179-0.9873.248-1.339-4.045-48.6351.496-0.3163.1564.9-1.622-48.81
14AA_DG104DC105:DG208DC209_BB-0.059-1.0123.323-0.63-1.809-49.7061.336-0.1163.2852.151-0.749-49.74
16CC_DC301DG302:DC411DG412_DD0.0455.4423.6640.715-0.908-7.668-36.83.0464.2556.7385.308-7.755
18CC_DC303DG304:DC409DG410_DD0.0735.6313.5041.2582.54-7.953-43.6093.151.599-17.5938.713-8.442
110CC_DC305DG306:DC407DG408_DD-0.0255.3733.6242.4040.468-7.084-42.7468.283.099-3.64318.736-7.495
17CC_DG302DC303:DG410DC411_DD0.035-1.1133.350.561-4.328-48.6061.6810.0853.2455.2460.68-48.79
19CC_DG304DC305:DG408DC409_DD-0.192-0.8423.271-0.975-3.755-55.161.127-0.2633.2084.05-1.051-55.285
111EE_DC501DG502:DC611DG612_FF0.075.5473.7732.7420.357-8.079-38.2778.3123.316-2.44318.757-8.538
113EE_DC503DG504:DC609DG610_FF0.0195.4213.434-0.2212.185-6.574-51.511-0.5131.551-18.39-1.858-6.93
115EE_DC505DG506:DC607DG608_FF0.1015.4793.7292.681.683-9.46-34.655.5762.588-9.84915.681-9.974
112EE_DG502DC503:DG610DC611_FF-0.085-0.9743.353-0.79-5.307-50.8861.499-0.1533.2416.156-0.916-51.15
114EE_DG504DC505:DG608DC609_FF0.063-1.0863.307-1.147-4.374-52.191.518-0.0043.2144.961-1.301-52.372

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.