A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5WWW  PDB ID: 5WWW 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
5WWW|1|B|A|85WWW|1|B|G|9s35
5WWW|1|B|G|45WWW|1|B|U|5ncSH
5WWW|1|B|G|95WWW|1|B|A|8s53
5WWW|1|B|G|95WWW|1|B|G|90BPh
5WWW|1|B|U|55WWW|1|B|G|4ncHS
5WWW|1|B|U|55WWW|1|B|U|50BPh
5WWW|1|B|U|65WWW|1|B|U|5n9BP
5WWW|1|B|U|65WWW|1|B|U|60BPh
5WWW|1|B|U|75WWW|1|B|U|70BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (4)Relative Frequency
0BPh41.000
Base-StackingCount (0)Relative Frequency

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)