A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5WJR  PDB ID: 5WJR 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
5WJR|1|B|A|45WJR|1|B|A|40BPh
5WJR|1|B|A|45WJR|1|B|C|5s35
5WJR|1|B|A|45WJR|1|B|G|3s53
5WJR|1|B|A|65WJR|1|B|C|5s53
5WJR|1|B|C|25WJR|1|B|C|20BPh
5WJR|1|B|C|25WJR|1|B|G|3s35
5WJR|1|B|C|25WJR|1|B|U|1s53
5WJR|1|B|C|55WJR|1|B|A|4s53
5WJR|1|B|C|55WJR|1|B|A|6s35
5WJR|1|B|C|55WJR|1|B|C|50BPh
5WJR|1|B|G|35WJR|1|B|A|4s35
5WJR|1|B|G|35WJR|1|B|C|2s53
5WJR|1|B|G|35WJR|1|B|G|30BPh
5WJR|1|B|U|15WJR|1|B|C|2s35
5WJR|1|B|U|15WJR|1|B|U|10BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (5)Relative Frequency
0BPh51.000
Base-StackingCount (3)Relative Frequency
s5331.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)