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As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5W5H  PDB ID: 5W5H 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
5W5H|1|B|A|35W5H|1|B|A|3n0BP
5W5H|1|B|A|35W5H|1|B|A|4s35
5W5H|1|B|A|3||||2_5755W5H|1|B|A|3||||2_575n0BP
5W5H|1|B|A|3||||2_5755W5H|1|B|A|4||||2_575s35
5W5H|1|B|A|3||||3_6655W5H|1|B|A|3||||3_665n0BP
5W5H|1|B|A|3||||3_6655W5H|1|B|A|4||||3_665s35
5W5H|1|B|A|3||||4_4655W5H|1|B|A|3||||4_465n0BP
5W5H|1|B|A|3||||4_4655W5H|1|B|A|4||||4_465s35
5W5H|1|B|A|45W5H|1|B|A|3s53
5W5H|1|B|A|45W5H|1|B|A|40BPh
5W5H|1|B|A|4||||2_5755W5H|1|B|A|3||||2_575s53
5W5H|1|B|A|4||||2_5755W5H|1|B|A|4||||2_5750BPh
5W5H|1|B|A|4||||3_6655W5H|1|B|A|3||||3_665s53
5W5H|1|B|A|4||||3_6655W5H|1|B|A|4||||3_6650BPh
5W5H|1|B|A|4||||4_4655W5H|1|B|A|3||||4_465s53
5W5H|1|B|A|4||||4_4655W5H|1|B|A|4||||4_4650BPh
5W5H|1|D|A|35W5H|1|D|A|3n0BP
5W5H|1|D|A|35W5H|1|D|A|4s35
5W5H|1|D|A|3||||2_5755W5H|1|D|A|3||||2_575n0BP
5W5H|1|D|A|3||||2_5755W5H|1|D|A|4||||2_575s35
5W5H|1|D|A|3||||3_6655W5H|1|D|A|3||||3_665n0BP
5W5H|1|D|A|3||||3_6655W5H|1|D|A|4||||3_665s35
5W5H|1|D|A|3||||4_4655W5H|1|D|A|3||||4_465n0BP
5W5H|1|D|A|3||||4_4655W5H|1|D|A|4||||4_465s35
5W5H|1|D|A|45W5H|1|D|A|3s53
5W5H|1|D|A|45W5H|1|D|A|40BPh
5W5H|1|D|A|4||||2_5755W5H|1|D|A|3||||2_575s53
5W5H|1|D|A|4||||2_5755W5H|1|D|A|4||||2_5750BPh
5W5H|1|D|A|4||||3_6655W5H|1|D|A|3||||3_665s53
5W5H|1|D|A|4||||3_6655W5H|1|D|A|4||||3_6650BPh
5W5H|1|D|A|4||||4_4655W5H|1|D|A|3||||4_465s53
5W5H|1|D|A|4||||4_4655W5H|1|D|A|4||||4_4650BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (8)Relative Frequency
0BPh81.000
Base-StackingCount (0)Relative Frequency

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)