A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 15-Nov-2017 number of released structures: 9208
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NDB ID: 5MPG  PDB ID: 5MPG 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
5MPG|1|B|A|35MPG|1|B|A|30BPh
5MPG|1|B|A|35MPG|1|B|G|4ns55
5MPG|1|B|C|75MPG|1|B|U|6n9BP
5MPG|1|B|G|45MPG|1|B|A|3ns55
5MPG|1|B|G|55MPG|1|B|G|4
5MPG|1|B|G|55MPG|1|B|U|6
5MPG|1|B|U|25MPG|1|B|U|10BPh
5MPG|1|B|U|65MPG|1|B|G|5


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (2)Relative Frequency
0BPh21.000
Base-StackingCount (0)Relative Frequency

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)