A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 15-Nov-2017 number of released structures: 9208
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NDB ID: 5XUS  PDB ID: 5XUS 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
11B_A-19:U-11_B424
14B_A-4:U-14_B120
16B_A-2:U-16_B120
110B_A2:DT-2_C120
111B_A3:DT-3_C120
112B_A4:DT-4_C120
115B_A7:DT-7_C120
120B_C12:DG-12_C119
122B_C14:DG-14_C119
127B_C19:DG-19_C119
12B_G-6:C-12_B119
15B_G-3:C-15_B119
18B_G0:DC0_C119
19B_G1:DC-1_C119
116B_G8:DC-8_C119
117B_G9:DC-9_C119
119B_G11:DC-11_C119
121B_G13:DC-13_C119
125B_G17:DC-17_C119
126B_G18:DC-18_C119
13B_U-5:A-13_B120
17B_U-1:U-17_B116
113B_U5:DA-5_C120
114B_U6:DA-6_C120
118B_U10:DA-10_C120
123B_U15:DA-15_C120
124B_U16:DA-16_C120
129C_DA2:DT-2_D120
130C_DA3:DT-3_D120
131C_DA4:DT-4_D120
134C_DA7:DT-7_D120
135C_DC8:DG-8_D119
132C_DG5:DC-5_D119
133C_DG6:DC-6_D119
136C_DG9:DC-9_D119
128C_DT1:DA-1_D120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)