A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 13-Sep-2017 number of released structures: 9117
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NDB ID: 5XOG  PDB ID: 5XOG 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
11P_A1:DT10_T120
15P_A5:DT6_T120
17P_A7:DT4_T120
13P_C3:DG8_T119
14P_G4:DC7_T119
16P_G6:DC5_T119
18P_G8:DC3_T119
19P_G9:DC2_T119
12P_U2:DA9_T120
110P_U10:DA1_T120
112T_DA-20:DT21_N10
117T_DA-15:DT16_N00
121T_DA-11:DT12_N00
123T_DA-9:DT10_N120
124T_DA-8:DT9_N120
127T_DA-5:DT6_N00
129T_DA-3:DT4_N120
111T_DC-21:DG22_N00
113T_DC-19:DG20_N119
115T_DC-17:DG18_N119
118T_DC-14:DG15_N119
119T_DC-13:DG14_N10
126T_DC-6:DG7_N119
131T_DC-1:DG2_N10
120T_DG-12:DC13_N10
125T_DG-7:DC8_N119
128T_DG-4:DC5_N10
130T_DG-2:DC3_N119
114T_DT-18:DA19_N120
116T_DT-16:DA17_N120
122T_DT-10:DA11_N120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)