A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5XFQ  PDB ID: 5XFQ 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14CC_DC4DG5:DC8DG9_DD-1.4980.3013.464-7.1662.20342.4960.1721.2643.6683.0119.79543.122
17CC_DC7DC8:DG5DG6_DD-1.832-0.1233.588-3.367-9.95532.9811.5332.4943.636-17.0055.75234.571
18CC_DC8DG9:DC4DG5_DD2.0650.7823.4326.1136.19534.420.262-2.3823.81110.266-10.13135.471
110CC_DC10DC11:DG2DG3_DD1.301-0.1963.4059.948-0.67737.214-0.205-0.6233.624-1.039-15.25638.481
111CC_DC11DC12:DG1DG2_DD-0.240.4632.7984.345.4431.4-0.0041.1042.789.901-7.89732.143
11CC_DG1DG2:DC11DC12_DD-0.5332.3363.4754.64510.14230.7622.1051.8843.9118.377-8.41732.677
12CC_DG2DG3:DC10DC11_DD-1.2431.3833.013-11.862-0.34542.5141.8750.5723.221-0.46515.9944.065
13CC_DG3DC4:DG9DC10_DD1.770.4993.3027.161-3.4831.8561.517-1.8293.533-6.219-12.79832.81
15CC_DG5DG6:DC7DC8_DD2.143-0.4773.7847.026-3.36828.954-0.058-2.3424.204-6.587-13.74229.962
16CC_DG6DC7:DG6DC7_DD-0.288-0.4463.01-0.52312.74425.308-3.5480.4812.50627.0081.10828.294
19CC_DG9DC10:DG3DC4_DD-1.1630.3653.759-7.54-0.03338.5130.5480.6683.909-0.04911.29939.217

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.