A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 15-Nov-2017 number of released structures: 9208
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NDB ID: 5W1Z  PDB ID: 5W1Z 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
18A_BRU8:DA13_B120
13A_DA3:BRU18_B120
11A_DC1:DI20_B129
12A_DC2:DI19_B129
16A_DC6:DI15_B129
17A_DC7:DI14_B129
14A_DI4:DC17_B129
15A_DI5:DC16_B129
19A_DI9:DC12_B129
110A_DI10:DC11_B129
118C_BRU8:DA13_D120
113C_DA3:BRU18_D120
111C_DC1:DI20_D129
112C_DC2:DI19_D129
116C_DC6:DI15_D129
117C_DC7:DI14_D129
114C_DI4:DC17_D129
115C_DI5:DC16_D129
119C_DI9:DC12_D129
120C_DI10:DC11_D129

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)