A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 15-Nov-2017 number of released structures: 9208
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NDB ID: 5W1H  PDB ID: 5W1H 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11B_A-23:U-4_B0.008-0.125-0.038-0.51710.4232.944
13B_C-21:G-8_B0.085-0.1220.00311.661-12.275-1.716
14B_C-20:G-9_B0.073-0.196-0.0189.393-9.84-2.643
15B_C-19:G-10_B0.208-0.123-0.16615.384-9.130.814
12B_G-22:C-7_B-0.285-0.088-0.137-6.123-2.023-0.668
16B_U5:C10_B-1.245.446-1.569-13.599-55.158-174.837

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.