A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5VYC  PDB ID: 5VYC 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
1476i2i2_A38A39:G515C517_i2i21.617-2.8053.361.225-1.797-9.19220.47512.1632.52811.017.505-9.445
1477i2i2_A39A40:U514G515_i2i20.224-0.5123.9162.04112.559.564-1.221-0.1053.75712.431-2.0360.775
1478i2i2_A40A486:G513U514_i2i20.997-0.0843.021-2.6777.57671.2-0.308-0.9352.9676.4862.29271.592
1496i2i2_A64G66:G82A83_i2i21.09-0.8253.952-9.258-7.53312.2032.887-10.6422.606-28.10234.53717.054
1498i2i2_A92A447:U443G444_i2i2-1.605-0.2492.792-1.7620.009-2.334.755-58.1451.261-0.179-37.093-2.921
1520i2i2_A102C357:G405U406_i2i21.62-0.9012.951-4.927-3.34787.235-0.587-1.2682.901-2.4243.56787.397
1519i2i2_A104A102:U406C356_i2i25.4370.751-3.364-86.08887.654163.4230.538-2.566-3.75244.00743.22172.093
1527i2i2_A107G108:C353U354_i2i2-0.584-0.8243.143-2.57515.94528.55-3.9680.6332.40429.5364.77132.719
1531i2i2_A111U112:A349C350_i2i2-0.907-0.9523.332-4.017-2.87923.111-1.3070.7963.527-7.0829.88223.626
1552i2i2_A147U148:A170A171_i2i2-0.317-0.3112.824-7.792-7.54535.9080.391-0.4112.835-11.90812.29837.459
1536i2i2_A297G298:C223A224_i2i2-0.019-2.3833.32-8.0290.31732.906-4.145-1.2793.2130.54913.91633.846
1538i2i2_A299U300:A221U222_i2i21.244-1.0843.052.3983.6140.128-1.949-1.5523.0115.242-3.48340.352
1540i2i2_A301A302:U219U220_i2i20.876-1.6852.155-9.381-0.17116.158-5.141-5.6681.446-0.55130.27518.669
1541i2i2_A302C304:A217U219_i2i2-0.933-3.6666.41416.76134.69272.183-4.4471.5014.31527.625-13.34780.571
1525i2i2_A360A363:C400A401_i2i25.398-0.1823.3081.419-1.439-2.45118.81112.6980.0628.13627.739-3.177
1571i2i2_A364C365:G395U396_i2i20.224-1.9443.4561.43913.74435.229-4.695-0.1692.55421.705-2.27237.763
1574i2i2_A371U372:A392U393_i2i2-0.886-1.4583.451-11.129.28937.654-3.9470.2522.05538.32214.52448.613
1581i2i2_A414A415:U422U423_i2i2-1.19-0.5762.521-9.091-0.95627.353-0.980.72.783-1.95318.57928.813
1582i2i2_A415U416:G421U422_i2i20.255-1.3643.3832.6273.4341.44-2.287-0.0763.2744.831-3.70141.655
1499i2i2_A447A449:C442U443_i2i20.33-1.0413.234-6.2971.63937.068-1.822-1.313.0922.5549.81337.615
1500i2i2_A449G452:C441C442_i2i22.841-1.4774.226-4.8947.04575.219-1.469-2.53.9335.7543.99775.635
1504i2i2_A455C456:G437G438_i2i2-1.0411.4763.1265.812.06-7.039-13.479-0.1770.682-56.21527.036-15.113
1507i2i2_A458C459:G470G471_i2i21.964-0.4012.435-1.7088.36719.858-3.397-5.7171.93322.9384.68321.6
1509i2i2_A460U461:A468A469_i2i2-1.069-2.533.51-4.3666.39911.236-16.6550.4062.05228.63619.53913.64
1485i2i2_A476G477:C49U51_i2i25.048-0.9383.816-2.06316.91252.321-2.135-5.6183.20818.6272.27254.839
1479i2i2_A486U487:A512G513_i2i2-3.904-2.6353.4132.7767.53620.798-9.16510.9671.82619.941-7.34522.279
1481i2i2_A489C490:G510U511_i2i2-0.489-2.1363.264-5.2445.97433.417-4.5130.0452.89210.2118.96334.323
1494i2i2_A500G62:C86U87_i2i2-1.838-2.253.1431.2828.51347.007-3.3882.3622.67210.569-1.59147.745
1437i2i2_A516G644:C30U31_i2i22.46-2.1242.982-16.578-0.578.655-1.639-2.2852.522-0.3912.94680.106
1600i2i2_A526G588:A560G559_i2i24.1562.012-2.936-7.103-15.151-91.786-1.6212.975-2.40610.481-4.913-92.962
1598i2i2_A529C527:G558A554_i2i2-0.752.251-7.027-2.475-8.036-60.872-3.005-0.488-6.7347.891-2.431-61.395
1597i2i2_A531A529:A554U553_i2i20.3891.879-3.848-9.928-34.827-56.103-3.2080.78-2.35933.478-9.544-65.968
1603i2i2_A564U566:C585G586_i2i2-0.071-1.9995.4339.48520.47764.103-3.0520.6454.63618.697-8.6667.558
1587i2i2_A594U595:A641U524_i2i2-2.409-1.0736.73814.043-50.20870.821.7572.485.934-38.688-10.82185.871
1592i2i2_A599C608:G635U637_i2i2-3.173-3.2985.8347.84813.91578.908-3.1732.8085.01410.846-6.11780.249
1442i2i2_A648U649:A25U26_i2i21.296-0.6952.9135.361.64328.155-1.744-1.5023.0573.336-10.88128.696
1446i2i2_A653C4:G20U21_i2i2-2.442-0.835.28735.6784.81457.657-1.0244.2373.3714.543-33.6767.145
1611i2i2_A664G665:C1162C1163_i2i20.069-1.4133.071-0.23118.40733.558-4.112-0.132.05129.3040.36838.148
1613i2i2_A671G1089:U1160U1161_i2i21.319-2.7322.8651.35312.2658.194-15.384-4.592-0.5556.197-6.19914.804
1623i2i2_A679G680:U1025C1026_i2i20.777-1.8094.152-5.0195.99960.636-2.133-1.063.9055.9154.94861.091
1629i2i2_A802C803:G860U863_i2i22.992-1.2133.785-24.06-5.93152.024-0.941-4.4432.413-6.36925.83457.251
1632i2i2_A816G817:A847U848_i2i2-1.52-0.9344.089-15.575-5.79670.919-0.5390.6134.356-4.92913.24372.59
1634i2i2_A818U820:G828C829_i2i20.945-2.9295.5210.95822.21972.192-3.457-0.244.67218.337-9.04375.774
1635i2i2_A830G831:C843U844_i2i2-1.197-4.253-0.613105.345-120.224139.785-2.1550.5780.241-60.565-53.07173.104
1638i2i2_A872G873:C912U914_i2i2-4.388-1.0370.243121.711-73.861-165.7460.532-2.1740.61937.00160.971-175.413
1662i2i2_A944U945:A981G982_i2i2-0.715-0.8343.014-5.33914.82326.869-4.0640.4312.34428.95410.42831.074
1671i2i2_A957G959:A964U966_i2i2-1.2161.5196.71725.52712.25790.310.5741.8066.4228.477-17.65693.722
1672i2i2_A990A992:G933A1001_i2i20.049-3.76-1.025146.80395.314-58.8711.8470.0781.243-48.34574.461-175.673
1673i2i2_A992G993:C1000G933_i2i2-0.976-0.3513.571-2.9551.582-13.578-0.17-7.0213.303-6.562-12.256-13.984
1618i2i2_A1031C1032:G673C674_i2i2-0.103-1.3043.043-2.6133.97935.753-2.62-0.172.8866.4454.23336.059
1676i2i2_A1034A1036:C1079U1081_i2i23.641-2.6895.73-6.283-11.85249.847-1.653-4.9535.721-13.7777.30351.509
1677i2i2_A1036G1037:C1078C1079_i2i21.784-1.7683.459-4.49619.43240.054-3.974-2.7332.21226.4786.12644.562
1684i2i2_A1050G1051:C1067G1068_i2i20.248-0.2433.618-2.24710.75963.98-0.724-0.3353.53210.0762.10464.818
1686i2i2_A1052C1053:G1065U1066_i2i20.845-0.0733.7632.2994.13650.494-0.421-0.83.7794.836-2.68850.701
1689i2i2_A1093C1094:G1151U1152_i2i20.052-1.2913.4741.0790.26138.191-2.0070.0643.4660.399-1.64938.207
1691i2i2_A1119G1121:U1112A1113_i2i2-5.4640.773.96-103.378-107.87526.832.7490.5744.081-62.35859.759150.266
1693i2i2_A1122C1123:G1110U1111_i2i20.212-2.5753.553-1.1225.5827.974-6.507-0.6872.98311.3942.29128.536
1703i2i2_A1133G1134:C1098G1099_i2i20.117-1.4913.176-3.259-2.18723.727-2.882-1.3183.252-5.2727.85624.045
1616i2i2_A1143A1145:U666U667_i2i20.434-1.5075.77317.2914.98957.244-2.721.0075.215.003-17.30561.287
1617i2i2_A1145A1144:G1142U666_i2i23.3623.843-1.6229.458-16.294-5.035-12.2559.4021.15965.01137.737-19.495
1713i2i2_A1170U1172:A1188A1189_i2i2-2.3841.427-0.873-112.177-137.08912.8110.5171.3530.305-69.52956.894177.153
1715i2i2_A1173U1174:U361G1187_i2i2-3.67-1.2952.084-4.3215.27636.219-3.0475.1191.82423.2486.57539.438
1451i2i2_A1195A1196:U8G16_i2i2-2.661-2.0863.107-1.7144.07-1.079-16.653-51.6231.602-70.295-29.6-4.547
1452i2i2_A1196G1197:C14U8_i2i23.779-1.3593.817-14.0514.53484.629-1.111-3.1253.2193.34510.36785.667
1456i2i2_A1200U1201:G10A11_i2i2-0.477-1.8923.386-4.6259.24434.054-4.4110.1242.83115.3517.68135.544
1460i2i2_A1204C1205:G1693U1694_i2i2-0.774-3.606-0.9120.918-103.877119.352-1.880.3070.099-52.84-61.509169.646
1463i2i2_A1208A1209:U1690U1691_i2i20.189-1.2573.0450.38210.55228.63-4.214-0.2942.44120.479-0.74130.477
1464i2i2_A1209G1210:C1689U1690_i2i2-2.172-2.563.7465.7748.08839.843-4.5583.7472.86611.649-8.31741.015
1469i2i2_A1214C1682:C1684U1685_i2i22.158-1.729-0.733-138.939-90.0164.508-0.893-1.035-0.843-45.03569.524178.056
1471i2i2_A1217C1218:G1680U1681_i2i20.77-1.0633.408-8.5784.07230.767-2.641-2.9122.9327.45515.70532.165
1722i2i2_A1223G1224:U1642U1643_i2i23.174-2.2653.271-9.5416.3189.682-11.058-15.755-0.85227.54741.59914.979
1731i2i2_A1253G1528:C1230C1231_i2i24.998-0.9374.2896.10641.07441.832-3.873-4.6993.01346.214-6.8758.278
1737i2i2_A1258C1666:G1658U1659_i2i2-2.247-4.342-1.1135.452-83.049119.331-2.3120.914-0.777-42.267-68.936169.381
1745i2i2_A1260A1620:U1616G1617_i2i2-1.1331.024-2.942-10.983-5.367-165.493-0.525-0.553-2.9492.705-5.535-165.576
1773i2i2_A1332U1333:A1498U1499_i2i21.918-2.0363.4729.651-2.22435.386-2.881-1.5183.959-3.573-15.50536.703
1790i2i2_A1353G1354:A1357U1358_i2i2-4.57-1.7482.776-2.08423.65454.944-2.6934.5232.08824.4062.1559.486
1795i2i2_A1396C1395:G1450G1449_i2i2-1.3283.9251.024164.124-16.556-113.977-1.926-0.2531.798.39983.259-171.821
1797i2i2_A1401A1402:U1444U1445_i2i2-0.226-1.5852.914-7.51824.28720.605-5.749-0.5040.7449.28615.25632.618
1798i2i2_A1402G1406:U1441U1444_i2i20.1343.0725.25733.15912.021125.5281.5510.3565.3756.705-18.496128.283
1800i2i2_A1414C1419:G1428G1429_i2i20.33-3.458-2.061138.88650.087121.286-1.56-0.681-2.22325.718-71.313164.297
1809i2i2_A1537C1538:U1595U1596_i2i2-2.266-1.1793.667-3.71220.97331.598-4.6592.982.65134.1016.03537.954
1818i2i2_A1561C1562:G1573C1574_i2i20.365-1.0043.351-3.5211.39655.088-1.167-0.6043.31.5073.80255.208
1746i2i2_A1620U1624:U1615U1616_i2i22.9261.106-3.2978.546-21.227114.3150.424-1.82-3.262-12.564-5.058115.779
1753i2i2_A1630U1631:U1608C1609_i2i2-0.1510.2093.067-4.01611.32944.447-0.66-0.1363.03214.665.19745.964
1756i2i2_A1633C1635:G1604G1605_i2i2-0.545-0.8115.461.02121.6289.102-1.2730.4155.20615.225-0.71991.153
1829i2i2_A1712C1713:G1820U1821_i2i20.149-0.8443.326-3.0981.37643.677-1.264-0.4993.2821.8464.15643.802
1834i2i2_A1719U1720:A1813G1814_i2i21.924-0.8863.585-5.07414.51265.859-1.389-1.943.21413.1624.60267.432
1838i2i2_A1724U1725:A1809U1810_i2i20.876-1.3673.609-1.4696.90237.197-3.05-1.5523.27610.7022.27837.838
1848i2i2_A1735G1736:C1798G1799_i2i20.752-0.6793.5651.04115.01166.852-1.21-0.6273.37513.45-0.93268.332
1858i2i2_A1745U1746:A1788G1789_i2i2-1.465-2.775-1.361107.557-130.638139.104-1.5420.606-0.855-65.58-53.993176.238
1870i2i2_A1845G1846:C1853U1854_i2i2-0.626-1.833.585-3.4387.09725.428-5.9050.4263.02915.6497.58226.603
1447i2i2_C4U5:A19G20_i2i2-1.129-1.6343.805-7.85513.23227.662-5.7160.4642.94725.34215.04431.581
1473i2i2_C35U36:A519A520_i2i2-0.502-2.2563.3116.6669.06727.919-6.0072.1872.30417.9-13.1630.06
1475i2i2_C37A38:C517G518_i2i2-0.216-0.9073.515-10.4345.47154.772-1.304-0.4113.4045.87111.19655.928
1497i2i2_C69G70:A79G80_i2i20.371-0.5473.615-2.0721.31768.645-0.538-0.4143.5941.1671.83668.684
1513i2i2_C96U97:A433G434_i2i20.744-1.2343.454-7.8758.9628.402-4.034-2.9042.65717.32715.22830.757
1515i2i2_C98C409:G431G432_i2i2-0.38-2.3023.3176.18817.37334.31-5.2631.2131.88627.157-9.67338.821
1526i2i2_C106A107:U354G355_i2i2-0.413-1.2723.595-0.71810.78637.833-3.2390.5243.13716.2341.08139.292
1545i2i2_C117U119:U345C346_i2i2-3.517-0.0113.15411.69216.11319.226-2.7889.3760.72637.573-27.26427.609
1558i2i2_C186G187:C212G213_i2i20.278-1.7163.214-12.96720.57225.771-5.278-2.0021.28137.23423.4735.291
1560i2i2_C188U189:U210G211_i2i20.822-1.1524.007-8.61231.39125.97-5.187-2.1381.5250.5513.86941.421
1561i2i2_C192C193:G206G207_i2i2-0.436-0.8113.112-4.15913.80327.741-3.8930.0922.47926.6328.02531.198
1562i2i2_C193C194:G205G206_i2i20.876-2.2783.096-1.9261.83820.001-7.263-3.2982.7815.2615.51520.175
1563i2i2_C194C195:G204G205_i2i20.225-0.8853.7030.575-2.02845.388-0.943-0.2333.739-2.627-0.74445.434
1564i2i2_C195C196:G203G204_i2i21.883-0.6774.234.5999.38145.101-1.904-1.8874.17912.04-5.90346.234
1565i2i2_C196U197:G202G203_i2i22.363-0.9624.55811.083-1.20118.746-1.7890.725.172-3.332-30.75221.785
1533i2i2_C293C295:G288G289_i2i20.852-3.516-3.607142.36779.402-42.1572.449-0.78-0.407-42.34175.917-164.157
1534i2i2_C295U296:U287G288_i2i2-1.163-1.1743.67810.70413.44445.871-2.492.2592.92216.58-13.20148.822
1542i2i2_C304G309:C216A217_i2i2-0.704-1.4173.2743.8219.45590.731-1.1740.5673.1246.626-2.67891.178
1567i2i2_C317C319:G332G333_i2i2-0.019-2.3535.85610.4626.01734.633-5.1812.5275.1699.748-16.9536.615
1568i2i2_C319G320:C331G332_i2i23.7240.2543.5227.66112.41429.64-2.159-4.9554.11522.623-13.96132.963
1570i2i2_C321C322:G329G330_i2i20.768-0.0794.74811.73730.87132.873-4.0850.5383.55843.311-16.46746.272
1521i2i2_C357C358:G404G405_i2i20.106-1.4263.629-0.26813.5932.268-4.486-0.2192.81823.2090.45834.944
1522i2i2_C358U359:G403G404_i2i20.64-1.4333.419-2.1788.87241.313-2.894-1.1113.02612.3933.04242.267
1524i2i2_C362A360:A401C402_i2i2-3.144-0.5372.95-8.1885.47816.207-4.7674.8633.72117.48426.13118.949
1572i2i2_C365U366:G394G395_i2i2-0.331-1.7173.3396.809-1.932.71-2.6611.7293.297-3.326-11.91733.444
1516i2i2_C409G410:C430G431_i2i20.284-1.5343.607-6.68711.90529.751-4.811-1.6762.6921.79812.24532.67
1502i2i2_C453U454:A439G440_i2i2-0.144-1.7983.619-3.37312.22732.717-4.855-0.2762.7920.7595.72635.027
1505i2i2_C456C457:G436G437_i2i2-0.221-2.0713.48-15.74310.2531.511-4.706-1.8062.53917.10626.27236.564
1506i2i2_C457A458:G471G436_i2i2-0.483-2.423.06416.5928.41441.8-3.7511.8592.22711.153-21.99545.583
1508i2i2_C459A460:A469G470_i2i20.917-1.1443.985.3314.45943.959-2.012-0.6133.9315.913-7.06944.478
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1484i2i2_C475A476:U51G52_i2i2-0.035-2.5012.7364.80210.9018.891-14.1592.111-0.20248.857-21.52214.855
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1912i3i3_A39A40:U514G515_i3i30.225-0.5093.9192.08212.46959.569-1.217-0.1033.76112.4-2.0760.775
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1933i3i3_A92A447:U443G444_i3i3-1.606-0.2482.795-1.7560.023-2.3194.546-58.4731.26-0.477-37.149-2.909
1955i3i3_A102C357:G405U406_i3i31.62-0.92.948-4.922-3.35687.192-0.587-1.2682.898-2.4313.56687.354
1954i3i3_A104A102:U406C356_i3i35.4380.752-3.362-86.07787.658163.4290.539-2.567-3.7544.00943.215172.096
1962i3i3_A107G108:C353U354_i3i3-0.585-0.8243.144-2.52915.9828.557-3.970.6412.40229.5874.68332.739
1966i3i3_A111U112:A349C350_i3i3-0.909-0.9533.331-3.975-2.85623.118-1.320.8163.525-7.0259.77823.624
1987i3i3_A147U148:A170A171_i3i3-0.317-0.312.821-7.769-7.56235.9060.394-0.4082.833-11.93612.26237.456
1971i3i3_A297G298:C223A224_i3i3-0.019-2.3843.318-7.9870.36332.901-4.156-1.2723.2080.62913.84833.832
1973i3i3_A299U300:A221U222_i3i31.245-1.0843.0472.4163.62340.121-1.951-1.5533.0095.263-3.5140.347
1975i3i3_A301A302:U219U220_i3i30.878-1.6852.156-9.372-0.13116.162-5.152-5.6691.443-0.42430.24518.668
1976i3i3_A302C304:A217U219_i3i3-0.931-3.6656.41516.75734.63672.19-4.4451.4994.3227.583-13.34580.556
1960i3i3_A360A363:C400A401_i3i35.396-0.1823.3091.405-1.424-2.43918.947113.4730.07428.01427.643-3.154
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1934i3i3_A447A449:C442U443_i3i30.333-1.0423.231-6.311.60237.097-1.817-1.3133.0892.4959.82537.644
1935i3i3_A449G452:C441C442_i3i32.84-1.4784.229-4.8537.07575.214-1.471-2.4993.9365.7783.96475.63
1939i3i3_A455C456:G437G438_i3i3-1.0411.4773.1285.83212.049-7.029-13.488-0.1490.684-56.18527.194-15.111
1942i3i3_A458C459:G470G471_i3i31.961-0.4012.438-1.7438.41119.842-3.411-5.7161.92923.0614.7821.604
1944i3i3_A460U461:A468A469_i3i3-1.07-2.5313.509-4.3876.45911.231-16.6520.4072.03528.86519.60513.671
1920i3i3_A476G477:C49U51_i3i35.048-0.9373.817-2.0416.9552.342-2.136-5.6123.2118.662.24654.868
1914i3i3_A486U487:A512G513_i3i3-3.903-2.6353.4132.7847.55420.788-9.17110.9681.82119.993-7.36922.276
1916i3i3_A489C490:G510U511_i3i3-0.489-2.1363.264-5.2245.95833.422-4.510.0472.89310.1838.92934.322
1929i3i3_A500G62:C86U87_i3i3-1.837-2.2493.1481.2858.41846.994-3.3842.3632.68210.455-1.59647.716
1872i3i3_A516G644:C30U31_i3i32.46-2.1232.982-16.566-0.51778.658-1.638-2.2842.523-0.40412.93780.107
11037i3i3_A526G589:A525A560_i3i3-0.6943.8633.484-139.75-88.484-173.184-1.876-0.4353.56544.249-69.886-179.135
11035i3i3_A528C527:G559G558_i3i31.0371.537-3.489-6.403-24.495-12.54-7.433.2450.061.986-16.202-28.208
11034i3i3_A529A528:G558U557_i3i3-2.3911.177-3.3699.24.0220.72218.022-12.255-1.95734.409-78.70510.066
11033i3i3_A531A529:U557U553_i3i3-0.7451.855-4.9994.7-42.76-104.261-1.915-0.54-4.27926.372.899-110.344
11040i3i3_A564U566:C585G586_i3i3-0.071-1.9975.4339.53720.43964.101-3.0480.6484.63718.663-8.70867.553
11023i3i3_A594U595:A641U524_i3i3-2.465-0.9126.69217.26-51.3865.5852.0832.7895.51-41.119-13.81383.106
11028i3i3_A599C608:G635U637_i3i3-3.171-3.35.8347.87113.92778.933-3.1742.8075.01410.852-6.13380.277
1877i3i3_A648U649:A25U26_i3i31.297-0.6952.9125.3721.59928.152-1.734-1.5023.0583.246-10.90628.693
1881i3i3_A653C4:G20U21_i3i3-2.442-0.8315.28635.6634.82557.636-1.0264.2383.3694.555-33.66667.121
11048i3i3_A664G665:C1162C1163_i3i30.071-1.4143.071-0.25418.38733.574-4.11-0.1362.05229.2650.40538.152
11050i3i3_A671G1089:U1160U1161_i3i31.322-2.7322.8641.35712.2318.168-15.425-4.612-0.55156.205-6.23414.762
11060i3i3_A679G680:U1025C1026_i3i30.775-1.8084.151-5.0346.03760.626-2.134-1.0593.9045.9544.96461.086
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11069i3i3_A816G817:A847U848_i3i3-1.523-0.9334.088-15.604-5.76570.917-0.5390.6144.355-4.90213.26872.593
11071i3i3_A818U820:G828C829_i3i30.946-2.935.52110.95522.18872.22-3.455-0.2424.67518.307-9.03975.793
11072i3i3_A830G831:C843U844_i3i3-1.199-4.253-0.614105.333-120.234139.638-2.1550.5790.242-60.574-53.066173.079
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11099i3i3_A944U945:A981G982_i3i3-0.714-0.8343.015-5.36814.7926.88-4.0610.4252.34828.88710.48431.073
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11055i3i3_A1031C1032:G673C674_i3i3-0.103-1.3023.044-2.6163.99135.735-2.62-0.1712.8876.4684.2436.042
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11053i3i3_A1143A1145:U666U667_i3i30.436-1.5045.77217.27515.057.197-2.7211.0065.215.024-17.30361.242
11054i3i3_A1145A1144:G1142U666_i3i33.3583.843-1.6249.465-16.298-5.012-12.2549.391.16265.06437.785-19.496
11150i3i3_A1170U1172:A1188A1189_i3i3-2.3861.423-0.874-112.158-137.1113.4270.5161.3540.305-69.53256.879177.16
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1886i3i3_A1195A1196:U8G16_i3i3-2.661-2.0843.107-1.7074.116-1.08-16.806-51.0381.612-70.551-29.263-4.585
1887i3i3_A1196G1197:C14U8_i3i33.777-1.3613.817-14.1074.52584.653-1.112-3.1243.2173.33810.40685.698
1891i3i3_A1200U1201:G10A11_i3i3-0.476-1.8923.386-4.6139.24634.038-4.4150.1262.8315.3627.66435.528
1895i3i3_A1204C1205:G1693U1694_i3i3-0.774-3.605-0.898120.917-103.876119.385-1.8790.3080.1-52.839-61.507169.651
1898i3i3_A1208A1209:U1690U1691_i3i30.023-1.4452.82-2.52517.64827.506-4.829-0.3641.61633.0764.73332.685
1899i3i3_A1209G1210:C1689U1690_i3i3-2.526-2.743.9055.1963.93137.246-4.7884.6373.2416.097-8.0637.792
1904i3i3_A1214C1682:C1684U1685_i3i32.16-1.729-0.731-138.924-90.028164.206-0.894-1.035-0.843-45.05169.519178.019
1906i3i3_A1217C1218:G1680U1681_i3i30.773-1.0633.409-8.5784.04730.768-2.638-2.9172.9337.4115.70632.163
11159i3i3_A1223G1224:U1642U1643_i3i33.172-2.2653.27-9.5546.3519.689-11.043-15.71-0.85627.64841.59415.006
11168i3i3_A1253G1528:C1230C1231_i3i34.999-0.9384.2886.12441.08941.82-3.874-4.6993.01346.232-6.89158.281
11174i3i3_A1258C1666:G1658U1659_i3i3-2.247-4.343-1.098135.461-83.012119.33-2.3120.914-0.776-42.248-68.941169.375
11182i3i3_A1260A1620:U1616G1617_i3i3-1.1311.025-2.942-11.006-5.39-165.496-0.525-0.552-2.952.717-5.547-165.579
11210i3i3_A1332U1333:A1498U1499_i3i31.917-2.0383.4739.726-2.27935.371-2.874-1.5023.965-3.661-15.62736.711
11227i3i3_A1353G1354:A1357U1358_i3i3-4.57-1.7472.778-2.10523.6354.915-2.6944.5252.09224.3932.17359.452
11232i3i3_A1396C1395:G1450G1449_i3i3-1.3283.9251.023164.141-16.576-113.892-1.926-0.2531.798.40983.27-171.822
11234i3i3_A1401A1402:U1444U1445_i3i3-0.229-1.5842.912-7.57624.28420.609-5.743-0.5050.74149.26215.36832.632
11235i3i3_A1402G1406:U1441U1444_i3i30.1323.0685.2633.12412.005125.5441.5490.3575.3786.696-18.476128.293
11237i3i3_A1414C1419:G1428G1429_i3i30.333-3.459-2.059138.88150.096121.244-1.561-0.682-2.2225.723-71.313164.286
11246i3i3_A1537C1538:U1595U1596_i3i3-2.267-1.1793.667-3.71620.96531.588-4.6612.9812.65234.0996.04437.942
11255i3i3_A1561C1562:G1573C1574_i3i30.365-1.0023.352-3.521.37355.069-1.164-0.6053.3011.4833.80255.189
11183i3i3_A1620U1624:U1615U1616_i3i32.9241.104-3.2988.551-21.213114.3060.423-1.819-3.262-12.556-5.061115.769
11190i3i3_A1630U1631:U1608C1609_i3i3-0.150.2073.067-4.02111.35244.439-0.665-0.1373.03214.6915.20445.962
11193i3i3_A1633C1635:G1604G1605_i3i3-0.544-0.8135.4591.01421.58989.073-1.2740.4145.20615.207-0.71491.12
11266i3i3_A1712C1713:G1820U1821_i3i30.149-0.8453.326-3.11.37343.629-1.267-0.4993.2811.8444.16343.754
11271i3i3_A1719U1720:A1813G1814_i3i31.923-0.8863.585-5.04714.5165.858-1.389-1.9383.21413.1614.57867.429
11275i3i3_A1724U1725:A1809U1810_i3i30.877-1.3673.607-1.4546.90837.194-3.051-1.5513.27510.7122.25537.835
11285i3i3_A1735G1736:C1798G1799_i3i30.752-0.6793.5630.98715.01466.85-1.21-0.633.37213.453-0.88468.33
11295i3i3_A1745U1746:A1788G1789_i3i3-1.464-2.775-1.359107.545-130.652139.253-1.5410.607-0.855-65.585-53.986176.253
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1882i3i3_C4U5:A19G20_i3i3-1.127-1.6343.807-7.84113.22727.684-5.7120.4632.9525.3215.00931.594
1908i3i3_C35U36:A519A520_i3i3-0.504-2.2553.3056.7229.0827.942-5.9952.1942.29717.906-13.25630.098
1910i3i3_C37A38:C517G518_i3i3-0.216-0.9083.515-10.3855.48854.758-1.306-0.4083.4045.89111.14755.908
1932i3i3_C69G70:A79G80_i3i30.372-0.5473.614-2.0511.33568.635-0.54-0.4143.5931.1841.81868.673
1948i3i3_C96U97:A433G434_i3i30.744-1.2333.455-7.8558.91828.408-4.027-2.9022.66117.24915.19230.746
1950i3i3_C98C409:G431G432_i3i3-0.378-2.3033.3156.21717.36234.282-5.2671.2141.88327.158-9.72538.796
1961i3i3_C106A107:U354G355_i3i3-0.412-1.2743.593-0.72310.75337.846-3.2370.5233.13716.1811.08739.297
1980i3i3_C117U119:U345C346_i3i3-3.519-0.013.15211.61416.14119.218-2.7999.3790.73337.664-27.10127.587
1992i3i3_C186G187:C212G213_i3i30.66-0.6635.041-6.78919.93720.078-7.68-3.4822.90444.33915.09829.02
1994i3i3_C188U189:U210G211_i3i30.94-1.1674.149-5.51927.6522.422-6.237-2.3921.58851.24310.22835.882
1995i3i3_C192C193:G206G207_i3i3-0.435-0.813.111-4.18313.77927.716-3.8920.0852.4826.618.07931.169
1996i3i3_C193C194:G205G206_i3i30.876-2.2773.099-1.9191.86620.02-7.264-3.2892.7815.3375.48720.196
1997i3i3_C194C195:G204G205_i3i30.224-0.8863.7020.571-2.04445.368-0.942-0.2323.738-2.648-0.7445.415
1998i3i3_C195C196:G203G204_i3i31.883-0.6784.2314.5839.36645.116-1.903-1.8894.1812.017-5.88146.244
1999i3i3_C196U197:G202G203_i3i32.365-0.9664.55711.067-1.20418.722-1.7980.7145.173-3.346-30.74821.756
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1969i3i3_C295U296:U287G288_i3i3-1.162-1.1743.67910.70313.44645.861-2.4922.2592.92216.585-13.20248.812
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1957i3i3_C358U359:G403G404_i3i30.642-1.4353.419-2.1648.92141.295-2.902-1.1123.02412.4653.02342.259
1959i3i3_C362A360:A401C402_i3i3-3.144-0.5362.952-8.2035.44516.233-4.744.853.72717.35726.14918.969
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1951i3i3_C409G410:C430G431_i3i30.284-1.5323.609-6.66411.89929.784-4.804-1.672.69421.77112.19232.693
1937i3i3_C453U454:A439G440_i3i3-0.142-1.7983.62-3.38412.22932.738-4.852-0.282.79120.755.74135.048
1940i3i3_C456C457:G436G437_i3i3-0.221-2.0713.479-15.75810.25631.51-4.705-1.8062.53817.11426.29436.57
1941i3i3_C457A458:G471G436_i3i3-0.482-2.423.06316.6048.40641.803-3.751.8582.22711.143-22.00845.588
1943i3i3_C459A460:A469G470_i3i30.92-1.1443.985.3524.38443.975-2.003-0.6143.9345.811-7.09444.49
1946i3i3_C462C463:G466G467_i3i3-0.641-1.0533.965.22921.694100.484-1.0590.5043.72313.989-3.372102.274
1919i3i3_C475A476:U51G52_i3i3-0.033-2.5022.7364.8210.8898.901-14.162.113-0.19848.782-21.59614.857
1923i3i3_C479G480:A45G47_i3i3-2.5851.0643.54119.5426.76123.2970.3571.6283.39915.084-11.014125.849
1925i3i3_C481U44:A485G41_i3i3-2.405-4.4890.7889.311171.395-136.5151.937-1.1862.437-85.9934.671-176.908
1917i3i3_C490C491:G509G510_i3i30.151-1.7513.7471.5834.37934.873-3.6250.0133.5117.266-2.62635.173
11021i3i3_C496C497:G505G506_i3i3-1.386-0.8363.1152.6577.73537.854-2.132.3892.79711.756-4.03838.696
11022i3i3_C497C498:G504G505_i3i30.041-2.1773.712-8.41617.81324.226-7.225-1.5731.66535.81116.91931.132
11036i3i3_C527A526:A560G559_i3i3-1.128-1.096-3.7318.256-7.759-48.2990.672-2.648-3.2649.05121.298-51.987
11029i3i3_C608U609:A634G635_i3i30.292-0.8933.217-2.98912.05139.512-2.485-0.7162.8117.3144.29441.342
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11243i3i3_C1460G1461:A1465G1466_i3i3-1.712-1.0782.777-6.6236.8246.449-1.821.6682.8068.5428.29647.359
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11244i3i3_C1534G1536:C1597U1602_i3i3-2.0895.4742.984-48.044-146.65584.5393.1290.943-1.294-77.24625.306161.073
11247i3i3_C1538U1539:A1594U1595_i3i32.71-1.2943.1922.88814.78430.454-4.426-4.2172.5526.226-5.12233.897
11253i3i3_C1559U1560:G1575G1576_i3i32.695-2.6912.76411.418-9.63422.648-2.832-2.34.384-21.754-25.78127.077
11256i3i3_C1562G1563:C1572G1573_i3i3-0.152-1.8343.216-1.7356.57720.397-7.305-0.2222.51117.9414.73321.49
11258i3i3_C1564C1565:G1570G1571_i3i3-0.962-2.0813.608-0.30622.08228.066-6.31.5351.60638.8230.53735.575
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1905i3i3_C1682A1217:U1681C1684_i3i33.099-2.686-1.256142.337-56.605-13.8980.499-0.621-3.99832.64882.094-153.38
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11262i3i3_C1705G1706:C1828G1829_i3i3-0.236-1.1613.0992.60117.84521.806-5.8110.9831.65739.578-5.76828.227
11267i3i3_C1713U1714:A1819G1820_i3i3-2.162-1.8293.1423.6385.05511.755-11.92512.2331.49622.71-16.34413.298
11268i3i3_C1716C1717:G1816G1817_i3i3-0.681-1.823.3992.1189.1923.824-6.5332.0972.46721.226-4.89225.597
11269i3i3_C1717G1718:A1815G1816_i3i3-1.449-0.5654.1980.4797.74464.488-0.941.3754.1047.23-0.44764.903
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1930i3i3_G62U63:A85C86_i3i30.674-1.7913.152-5.1143.41837.241-3.179-1.6552.8685.3077.94237.728
1947i3i3_G95C96:G434A435_i3i30.896-0.723.273-11.3648.70228.621-2.767-3.5342.43716.37221.3831.933
1963i3i3_G108U109:U352C353_i3i31.062-1.0934.1133.27317.97939.302-3.616-1.0543.39825.147-4.57943.19
1967i3i3_G113C293:G289U290_i3i3-0.7910.759-3.272-7.836-7.893-149.306-0.425-0.378-3.2724.091-4.062-149.454
1984i3i3_G122G123:C341C342_i3i3-0.981-1.4222.929-6.6537.79630.069-3.8550.7242.63914.50612.37931.73
1985i3i3_G123U124:A339C341_i3i31.132-0.4073.90214.13211.30134.184-2.3630.4683.76117.768-22.21838.551
1986i3i3_G146A147:A171A173_i3i3-2.888-2.592.96713.1512.02261.849-2.8333.1511.90211.446-12.51964.12
1989i3i3_G153U154:A164G165_i3i30.5861.0092.9220.794-0.039-22.652-2.5541.7482.9010.12.021-22.666
1991i3i3_G155G156:C162U163_i3i3-2.624-1.3173.469-3.93617.121.322-6.9184.5552.25838.8228.93727.55
1993i3i3_G187C188:G211C212_i3i3-1.1220.571.96-5.1811.0141.0540.0721.2062.15615.2997.19842.744
1972i3i3_G298A299:U222C223_i3i31.589-2.0053.0935.7485.3925.474-5.671-2.0392.89811.866-12.65426.646
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1936i3i3_G452C453:G440C441_i3i3-0.909-1.5732.916-0.803-7.06429.619-1.6531.5793.219-13.5731.54430.442
1918i3i3_G474C475:G52C53_i3i3-1.333-1.6183.668-2.65311.61256.215-2.3721.2323.35712.1712.78157.362
1921i3i3_G477G478:C48C49_i3i3-2.254-2.0933.345-4.53711.57925.401-6.8433.622.52724.5469.61728.237
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1924i3i3_G480C481:G41A45_i3i30.55-4.384.308-11.521-14.135-28.41510.003-1.0372.03525.72-20.963-33.661
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11577i4i4_U1137G1140:C1147A1148_i4i41.729-0.4376.873-11.9494.991177.094-0.222-0.8746.8682.4965.977177.112
11584i4i4_U1172A1173:G1187A1188_i4i45.646-0.9893.7572.3874.725-3.143-10.87562.7210.49-52.94626.747-6.156
11586i4i4_U1174G1175:U1186U361_i4i41.408-2.1513.0480.0634.20730.487-4.785-2.6432.7367.952-0.1230.769
11589i4i4_U1177U1178:A1183G1184_i4i40.149-2.2783.35515.5614.50222.636-6.6832.3131.48829.819-31.99530.966
11329i4i4_U1201U1202:A1697G10_i4i40.996-1.6822.9563.1359.2525.842-5.411-1.452.32919.805-6.71327.597
11330i4i4_U1202G1203:C1696A1697_i4i40.524-1.5253.43616.98727.01423.88-5.1521.0541.29245.806-28.80339.67
11594i4i4_U1225G1226:A1640A1641_i4i4-0.802-1.253.6742.15612.09352.191-2.2111.0373.29713.533-2.41353.519
11605i4i4_U1243U1244:G1255G1257_i4i40.88-0.6773.0545.4330.48119.879-0.395-0.463.0760.277-3.138119.955
11606i4i4_U1244G1245:C1254G1255_i4i4-0.768-1.9583.179-17.5512.29515.456-5.632-4.3442.4846.37648.77123.458
11635i4i4_U1288U1289:U1307U1310_i4i42.029-0.6693.064-2.09-24.18970.8090.18-1.7433.078-20.2941.75474.338
11637i4i4_U1323G1324:U1504U1505_i4i4-0.137-1.632.9854.8883.7125.462-4.4781.4622.6528.266-10.88926.179
11642i4i4_U1329A1332:U1499G1500_i4i4-0.191-2.2733.4435.6611.85915.683-10.7522.6121.28436.254-17.30320.434
11644i4i4_U1333G1334:G1330A1498_i4i41.5540.3813.475-17.39925.803-2.776-6.81-1.2290.864-70.498-47.537-31.241
11649i4i4_U1339C1341:U1485A1487_i4i40.089-6.0040.426-172.55637.949-170.0822.9970.0240.544-18.976-86.284-179.713
11650i4i4_U1342C1389:G1481C1482_i4i4-3.361-0.7523.42127.228-10.258100.132-0.3352.5282.755-6.592-17.498103.174
11655i4i4_U1346U1347:A1382A1383_i4i40.65-2.8913.675-1.4613.72331.584-5.998-1.4713.2896.8062.67131.83
11657i4i4_U1350G1351:U1360A1379_i4i42.043-2.0332.993-1.70413.1131.562-5.083-3.691.91222.8862.97534.154
11652i4i4_U1390C1391:G1479A1480_i4i40.4-1.5633.737-8.928-0.77328.037-2.892-2.9553.488-1.54617.8629.407
11673i4i4_U1457G1458:C1468A1469_i4i4-1.664-1.3543.06-6.82711.40120.945-6.3121.9922.43128.01616.77624.765
11604i4i4_U1530C1532:G1638A1228_i4i40.691-3.0836.5165.522.68648.679-4.115-0.0086.3863.244-6.66649.041
11681i4i4_U1539G1540:C1593A1594_i4i4-0.092-1.4292.578-7.58124.41921.301-5.001-0.6150.6548.5515.07333.165
11684i4i4_U1549G1550:C1582G1584_i4i4-1.530.0466.505-6.98219.97-48.078-2.66-2.6495.807-23.247-8.129-52.272
11687i4i4_U1560A1561:C1574G1575_i4i4-1.343-1.4343.087-7.90816.77519.642-6.7821.1341.76639.57218.65426.951
11617i4i4_U1624U1625:A1614U1615_i4i4-3.79-0.3310.585119.631-132.052-165.0310.201-1.8630.8866.03259.821-179.763
11618i4i4_U1625C1626:G1613A1614_i4i4-0.421-1.7022.872-8.22920.98628.922-4.862-0.1691.42535.92814.08936.52
11624i4i4_U1631G1632:A1607U1608_i4i4-0.2411.1943.4954.5223.04152.8211.1270.5813.5233.408-5.06753.082
11609i4i4_U1667U1668:G1656G1657_i4i40.118-1.4043.1236.12-0.57636.572-2.1340.6023.122-0.91-9.66837.068
11610i4i4_U1668G1669:C1655G1656_i4i40.387-2.4713.33-6.98520.1125.019-7.0-1.5960.98438.68113.43632.74
11614i4i4_U1672U1673:A1651U1653_i4i4-0.128-1.4556.233-24.38129.82749.831-3.967-1.9684.47630.71925.1162.224
11696i4i4_U1707C1708:G1826U1827_i4i40.14-0.7253.598-11.0095.65451.203-1.22-0.943.416.43612.52952.579
11697i4i4_U1711A1712:U1821A1822_i4i4-1.3-1.0762.695-6.03316.77925.266-4.5561.5351.89133.54712.06230.84
11704i4i4_U1720G1722:U1812A1813_i4i40.236-4.9444.70810.54212.728-11.572.24910.5165.701-42.5435.236-20.151
11708i4i4_U1725G1726:U1808A1809_i4i4-0.041-1.6473.24610.32516.91824.063-5.8181.7511.62934.116-20.8231.081
11711i4i4_U1728U1729:G1805A1806_i4i4-1.498-0.872.9951.0121.1838.481-1.4512.3842.931.79-1.53538.511
11712i4i4_U1729U1730:U1804G1805_i4i4-0.366-2.1883.033-9.96118.79911.904-8.846-1.069-0.04253.98628.60624.346
11713i4i4_U1730G1732:C1802U1804_i4i4-0.625-2.0546.6-1.316.14573.19-2.6750.4366.11213.3811.07774.715
11715i4i4_U1733G1734:A1800A1801_i4i40.204-0.5144.094-1.9839.25669.044-0.865-0.2684.08.1271.74169.61
11723i4i4_U1741C1742:G1792A1793_i4i40.698-1.9152.9881.9262.64720.057-6.486-1.2082.7697.536-5.48220.32
11728i4i4_U1746C1747:G1787A1788_i4i40.476-1.7053.801-3.6862.97235.274-3.281-1.3883.5844.8786.04935.58
11733i4i4_U1839U1840:A1859A1860_i4i40.515-0.8112.9650.91912.62225.665-4.098-0.8662.33326.462-1.92628.569
11734i4i4_U1840C1841:G1858A1859_i4i40.401-1.6583.629-3.6085.87340.775-3.023-0.9833.3248.3575.13441.329
11738i4i4_U1844A1845:U1854G1855_i4i4-0.432-1.2282.4969.78423.04325.32-4.0841.5870.89441.761-17.73135.462

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.