A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 15-Nov-2017 number of released structures: 9208
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NDB ID: 5VI5  PDB ID: 5VI5 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
16O_DA6:DT44_P120
18O_DA8:DT42_P120
19O_DA9:DT41_P120
110O_DA10:DT40_P120
111O_DA11:DT39_P120
117O_DA17:DT33_P00
118O_DA18:DT32_P120
119O_DA19:DT31_P120
129O_DA42:DT8_P120
133O_DA46:DT4_P120
12O_DC2:DG48_P119
17O_DC7:DG43_P119
125O_DC25:DG25_P119
128O_DC41:DG9_P119
130O_DC43:DG7_P119
136O_DC49:DG1_P119
11O_DG1:DC49_P119
15O_DG5:DC45_P10
112O_DG12:DC38_P119
114O_DG14:DC36_P119
122O_DG22:DC28_P119
124O_DG24:DC26_P119
131O_DG44:DC6_P119
132O_DG45:DC5_P119
135O_DG48:DC2_P119
13O_DT3:DA47_P120
14O_DT4:DA46_P10
113O_DT13:DA37_P120
115O_DT15:DA35_P120
116O_DT16:DA34_P10
120O_DT20:DA30_P120
121O_DT21:DA29_P120
123O_DT23:DA27_P120
126O_DT26:DA24_P120
127O_DT40:DA10_P120
134O_DT47:DA3_P120
140P_DA15:U1_Q00
138P_DC13:G3_Q119
139P_DG14:C2_Q119
137P_DT12:A4_Q120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)