A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 13-Sep-2017 number of released structures: 9117
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NDB ID: 5VAJ  PDB ID: 5VAJ 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
12C_A2:DT11_D120
14C_A4:DT9_D120
19C_A9:DT4_D120
13C_C3:DG10_D119
15C_C5:DG8_D119
16C_C6:DG7_D119
110C_C12:DG1_D119
11C_G1:DC12_D119
18C_G8:DC5_D119
17C_U7:DA6_D120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)