A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5V3I  PDB ID: 5V3I 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
116A_A614:G773_A18
111A_A639:G620_A00
117A_A645:A613_A50
120A_A648:U770_A120
121A_A649:U769_A120
127A_A656:G763_A18
131A_A661:U712_A120
137A_A667:U679_A120
138A_A668:U678_A120
147A_A685:U701_A120
150A_A688:U698_A120
155A_A720:A652_A50
170A_A739:G736_A100
166A_A743:U732_A120
165A_A744:U731_A120
163A_A746:U729_A120
157A_A754:U723_A120
12A_C602:G784_A119
14A_C604:G782_A119
19A_C610:G775_A10
144A_C626:C634_A00
113A_C641:G618_A119
123A_C651:G767_A119
128A_C658:G716_A119
130A_C660:G714_A119
132A_C662:G711_A119
133A_C663:G710_A119
136A_C666:G680_A119
149A_C687:G699_A119
153A_C718:G757_A119
168A_C741:G734_A119
167A_C742:G733_A119
162A_C747:G728_A119
161A_C748:G727_A119
158A_C753:G724_A119
156A_C755:G722_A119
11A_G601:C785_A119
13A_G603:C783_A10
15A_G606:C780_A119
17A_G608:U777_A128
110A_G611:A774_A50
141A_G623:C637_A119
142A_G624:C636_A119
143A_G625:C635_A119
112A_G640:C619_A119
114A_G642:U617_A128
115A_G643:C616_A119
118A_G646:C772_A119
122A_G650:C768_A119
124A_G653:C766_A119
125A_G654:C765_A119
126A_G655:C764_A119
140A_G670:C676_A119
145A_G683:U703_A128
148A_G686:U700_A128
151A_G689:C697_A10
152A_G717:C758_A119
169A_G740:C735_A119
160A_G749:C726_A119
159A_G752:A725_A18
16A_U607:A779_A120
18A_U609:A776_A00
119A_U647:G771_A128
129A_U659:A715_A120
134A_U664:U709_A116
139A_U669:A677_A120
135A_U681:U708_A30
146A_U684:A702_A120
154A_U719:A756_A120
164A_U745:A730_A120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)