A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5TYX  PDB ID: 5TYX 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14TT_DA5DT6:DA4DT5_PP0.659-0.342.822-2.2068.32219.808-3.681-2.4952.39722.8466.05621.581
16TT_DA7DC8:DG2DT3_PP-0.508-1.3363.4082.4974.18635.953-2.7411.1713.1966.744-4.02236.271
11TT_DC1DG2:DC3DG4_DD-0.3890.8313.1482.7882.0334.3981.0961.073.153.422-4.69934.566
17TT_DC8DG9:DC1DG2_PP-0.85-1.3523.579-6.0915.9435.541-3.0480.4453.4119.5639.80536.513
12TT_DG2DG3:DC2DC3_DD0.313-0.0583.391-2.0145.22134.957-0.89-0.8213.3268.6233.32635.388
13TT_DG3DC4:DG1DC2_DD0.5150.0453.0483.9341.33827.099-0.217-0.173.0892.834-8.33427.41
15TT_DT6DA7:DT3DA4_PP0.169-1.2183.222-5.493.99128.886-3.183-1.4352.9497.86510.81829.656

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.