A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 15-Nov-2017 number of released structures: 9208
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NDB ID: 5TYW  PDB ID: 5TYW 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14TT_DA5DT6:DA4DT5_PP0.639-0.2772.798-4.2079.42119.951-3.57-2.9192.25825.13611.22422.437
16TT_DA7DC8:DG2DT3_PP-0.478-1.3273.3792.6863.36536.037-2.6061.1473.2035.416-4.32236.285
11TT_DC1DG2:DC3DG4_DD-0.3880.7983.2382.0313.58534.9190.7860.9443.2745.949-3.3735.154
17TT_DC8DG9:DC1DG2_PP-0.817-1.3453.566-6.1755.94235.428-3.0440.3813.3939.5929.96836.418
12TT_DG2DG3:DC2DC3_DD0.385-0.0253.394-1.9084.83635.275-0.767-0.9153.3367.9283.12835.644
13TT_DG3DC4:DG1DC2_DD0.5130.1462.9885.1351.04226.7430.0670.1043.0352.226-10.96827.243
15TT_DT6DA7:DT3DA4_PP0.109-1.2633.186-5.122.92228.501-3.123-1.2852.985.85510.26129.092

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.