A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5TYU  PDB ID: 5TYU 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14TT_DA5DT6:DA4DT5_PP0.412-0.3283.008-2.9619.88420.522-3.938-1.9682.50225.7487.71422.945
16TT_DA7DC8:DG2DT3_PP-0.56-1.0863.3642.5773.70335.156-2.331.3013.1896.099-4.24535.435
11TT_DC1DG2:DC3DG4_DD0.8520.7383.1424.389-3.04436.3171.575-0.7733.15-4.852-6.99536.694
17TT_DC8DG9:DC1DG2_PP-0.624-1.0623.502-6.199.00135.669-2.9160.1153.2114.2879.82637.252
12TT_DG2DG3:DC2DC3_DD-0.80.03.341-5.382.86735.876-0.4150.5033.4114.6148.65636.374
13TT_DG3DC4:DG1DC2_DD0.3060.0463.0323.941.528.103-0.2290.2213.0433.068-8.05628.411
15TT_DT6DA7:DT3DA4_PP-0.324-0.833.194-4.3163.57729.808-2.285-0.2233.0916.8768.29930.318

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.