A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5TYU  PDB ID: 5TYU 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
15T_DA5:DT5_P-0.052-0.225-0.019-12.976.4283.847
17T_DA7:DT3_P0.342-0.2380.41113.717-17.4150.09
11T_DC1:DG4_D0.036-0.190.528-11.663-8.127-2.299
14T_DC4:DG1_D0.41-0.075-0.113.729-2.4540.865
18T_DC8:DG2_P0.29-0.201-0.00915.452-17.6460.233
12T_DG2:DC3_D-0.263-0.1710.1380.033-5.4693.385
13T_DG3:DC2_D-0.196-0.0140.3221.183-7.954-1.344
19T_DG9:DC1_P-0.271-0.1220.343-0.767-12.101-0.111
16T_DT6:DA4_P0.054-0.1270.0019.9450.287.271

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.