A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5TYE  PDB ID: 5TYE 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14TT_DA5DT6:DA4DT5_PP0.646-0.5662.858-1.2098.39220.633-4.096-2.0512.40322.2573.20622.289
16TT_DA7DC8:DG2DT3_PP-0.307-1.363.4082.8433.31336.547-2.6140.883.2455.26-4.51336.798
11TT_DC1DG2:DC3DG4_DD-0.5340.5373.1540.183-3.51837.7391.2580.8453.091-5.424-0.28337.897
17TT_DC8DG9:DC1DG2_PP-0.834-1.3793.555-5.3685.5435.349-3.0620.5313.3938.9928.71236.155
12TT_DG2DG3:DC2DC3_DD0.898-0.3663.5214.6227.81532.208-2.037-0.7333.43413.749-8.13133.431
13TT_DG3DC4:DG1DC2_DD0.5290.0693.034.6274.46427.789-0.82-0.083.059.141-9.47328.508
15TT_DT6DA7:DT3DA4_PP0.159-1.2053.25-6.4763.08328.019-3.078-1.7132.9916.2413.10628.905

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.