A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5TYE  PDB ID: 5TYE 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
15T_DA5:DT5_P0.078-0.163-0.108-15.6089.7142.03
17T_DA7:DT3_P0.155-0.1540.41411.131-14.6630.232
11T_DC1:DG4_D-0.124-0.0850.35-6.518-9.767-1.601
14T_DC4:DG1_D0.465-0.09-0.21715.317-0.9650.714
18T_DC8:DG2_P0.37-0.212-0.13811.666-9.6771.363
12T_DG2:DC3_D0.6410.1280.6469.004-2.961-1.17
13T_DG3:DC2_D-0.288-0.0320.1511.618-8.927-2.398
19T_DG9:DC1_P-0.071-0.1470.25-3.745-10.461-0.906
16T_DT6:DA4_P-0.04-0.102-0.22610.1082.1772.124

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.