A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 15-Nov-2017 number of released structures: 9208
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NDB ID: 5TXZ  PDB ID: 5TXZ 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
15T_DA5:DT5_P0.008-0.186-0.208-16.52610.7451.897
17T_DA7:DT3_P0.163-0.1630.30910.633-13.451.225
11T_DC1:DG4_D0.38-0.1710.377-11.415-12.552-7.067
14T_DC4:DG1_D0.304-0.12-0.2912.8741.2-0.945
18T_DC8:DG2_P0.26-0.174-0.13510.926-10.717-0.463
12T_DG2:DC3_D0.681-0.0810.3484.509-14.301-4.308
13T_DG3:DC2_D-0.288-0.1830.182-0.479-8.584-2.216
19T_DG9:DC1_P-0.131-0.1490.075-3.042-9.922-0.946
16T_DT6:DA4_P0.0-0.1540.0638.6910.7343.913

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.