A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 20-Sep-2017 number of released structures: 9123
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NDB ID: 5T5K  PDB ID: 5T5K 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
11I_DA2:DA90_J00
13I_DA5:DT88_J120
17I_DA11:DT82_J00
127I_DA31:DT62_J120
130I_DA34:DT59_J120
133I_DA37:DT56_J120
134I_DA38:DT55_J120
137I_DA41:DT52_J120
138I_DA42:DT51_J120
139I_DA43:DT50_J120
147I_DA51:DT42_J120
159I_DA63:DT30_J120
166I_DA70:DT23_J120
167I_DA71:DT22_J120
175I_DA79:DT14_J00
179I_DA83:DT10_J120
181I_DA85:DT8_J00
186I_DA90:DT3_J120
14I_DC7:DG86_J119
18I_DC12:DG81_J10
112I_DC16:DG77_J119
115I_DC19:DG74_J10
118I_DC22:DG71_J10
121I_DC25:DG68_J119
122I_DC26:DG67_J119
132I_DC36:DG57_J10
141I_DC45:DG48_J10
145I_DC49:DG44_J119
148I_DC52:DG41_J10
151I_DC55:DG38_J119
161I_DC65:DG28_J119
163I_DC67:DG26_J119
165I_DC69:DG24_J10
168I_DC72:DG21_J119
173I_DC77:DG16_J00
177I_DC81:DG12_J00
183I_DC87:DG6_J10
185I_DC89:DG4_J10
12I_DG4:DC89_J119
15I_DG9:DC84_J119
110I_DG14:DC79_J10
113I_DG17:DC76_J10
117I_DG21:DC72_J119
119I_DG23:DC70_J119
120I_DG24:DC69_J10
126I_DG30:DC63_J10
140I_DG44:DC49_J119
142I_DG46:DC47_J119
149I_DG53:DC40_J119
150I_DG54:DC39_J119
152I_DG56:DC37_J119
158I_DG62:DC31_J00
162I_DG66:DC27_J00
170I_DG74:DC19_J10
172I_DG76:DC17_J10
174I_DG78:DC15_J10
176I_DG80:DC13_J10
180I_DG84:DC9_J119
16I_DT10:DA83_J120
19I_DT13:DA80_J120
111I_DT15:DA78_J120
114I_DT18:DA75_J00
116I_DT20:DA73_J120
123I_DT27:DA66_J120
124I_DT28:DA65_J120
125I_DT29:DA64_J00
128I_DT32:DA61_J120
129I_DT33:DA60_J120
131I_DT35:DA58_J120
135I_DT39:DA54_J10
136I_DT40:DA53_J120
143I_DT47:DA46_J120
144I_DT48:DA45_J00
146I_DT50:DA43_J120
153I_DT57:DA36_J10
154I_DT58:DA35_J00
155I_DT59:DA34_J10
156I_DT60:DA33_J120
157I_DT61:DA32_J120
160I_DT64:DA29_J120
164I_DT68:DA25_J120
169I_DT73:DA20_J120
171I_DT75:DA18_J120
178I_DT82:DA11_J120
182I_DT86:DA7_J120
184I_DT88:DA5_J120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)