# Minimized with a chisquare of 0.066822. ################################################################################ # # File: Cpro_riboseC3endo_O3H_O5P_anti_+sc # Date: 08-Dec-97 20:02:10 # # This file was created by software developed by the # Nucleic Acid Database Project # # H. M. Berman, W. K. Olson, D. L. Beveridge, J. D. Westbrook, A. Gelbin, # T. Demeny, S. H. Shieh, A. R. Srinivasan, and B. Schneider. (1992). # The Nucleic Acid Database: A Comprehensive Relational Database of # Three-Dimensional Structures of Nucleic Acids. Biophys J., 63, 751-759. # # Questions or comments should be directed to: # # # ndbadmin@ndbserver.rutgers.edu # ################################################################################ data_Cpro_riboseC3endo_O3H_O5P_anti_+sc # _chem_comp.id Cpro_riboseC3endo_O3H_O5P_anti_+sc _chem_comp.name ;protonated cytidine-5'-phosphate ; _chem_comp.type 'RNA linking' _chem_comp.model_details ;Model constructed for protonated cytidine-5'-phosphate from subcomponents for protonated base, sugar and phosphate. The sugar is ribose in the C3'-endo conformation, and geometries for the gamma torsion angle (synclinal), the chi torsion angle (antiperiplanar), and the C3*-O3* and C5*-O5* bonds are inserted from other models. ; _chem_comp.parent . _chem_comp.formula 'H11 C9 N3 O8 P1 ' _chem_comp.formula_weight 320.20 _chem_comp.number_atoms_all 32 _chem_comp.number_atoms_nh 21 _chem_comp.ndb_formal_charge -1 # loop_ _ndb_composite.comp_id _ndb_composite.sub_comp_id _ndb_composite.sub_type _ndb_composite.details Cpro_riboseC3endo_O3H_O5P_anti_+sc cyt_pro base 'Model constructed for protonated cytosine with an N1-glycosidic linkage.' Cpro_riboseC3endo_O3H_O5P_anti_+sc ribose_C3endo_O3H_O5P_+sc sugar ;Model constructed for 1'-amino-ribose in the C3'-endo conformation. the gamma torsion (synclinal), the corresponding O4*-C4*-C5*-O5* torsion, and the C3*-O3* and C5*-O5* bond geometries are inserted from other models. ; Cpro_riboseC3endo_O3H_O5P_anti_+sc PO4 phosphate . # loop_ _chem_comp_link.link_id _chem_comp_link.type_comp_1 _chem_comp_link.type_comp_2 _chem_comp_link.ndb_comp_id_comp_1 _chem_comp_link.ndb_comp_id_comp_2 ribose_pyrimidine sugar base ribose_C3endo_O3H_O5P_+sc cyt_pro ribose_O5_PO4 sugar phosphate ribose_C3endo_O3H_O5P_+sc PO4 # loop_ _ndb_dbsearch.db _ndb_dbsearch.sample_size _ndb_dbsearch.id _ndb_dbsearch.dbversion _ndb_dbsearch.time _ndb_dbsearch.dbreleasedate _ndb_dbsearch.comp_id csd 21 cyt_pro 512 ;Mon Dec 8 13:26:10 1997 ; 'Sep 15 19:34:11 BST 1996' Cpro_riboseC3endo_O3H_O5P_anti_+sc csd 26 ribose 512 ;Mon Dec 8 13:30:59 1997 ; 'Sep 15 19:34:11 BST 1996' Cpro_riboseC3endo_O3H_O5P_anti_+sc csd 23 ribose_C3endo_O3H 512 ;Mon Dec 8 13:40:25 1997 ; 'Sep 15 19:34:11 BST 1996' Cpro_riboseC3endo_O3H_O5P_anti_+sc csd 19 ribose_O5P 512 ;Mon Dec 8 13:49:41 1997 ; 'Sep 15 19:34:11 BST 1996' Cpro_riboseC3endo_O3H_O5P_anti_+sc csd 94 all_ribose_gamma 512 ;Mon Dec 8 14:31:38 1997 ; 'Sep 15 19:34:11 BST 1996' Cpro_riboseC3endo_O3H_O5P_anti_+sc ndb 15 PO4_1 . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc csd 13 ribose_C3endo_pyrimidine 512 'Wed Jul 2 01:42:39 1997' 'Sep 15 19:34:11 BST 1996' Cpro_riboseC3endo_O3H_O5P_anti_+sc csd 16 C3endo_pyrimidine_anti . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc ndb 15 phosphate_O5_1 . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.substruct_code _chem_comp_atom.charge _chem_comp_atom.model_cartn_x _chem_comp_atom.model_cartn_y _chem_comp_atom.model_cartn_z Cpro_riboseC3endo_O3H_O5P_anti_+sc N1 N base 0 4.2132 0.0760 0.5473 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2 C base 0 5.5228 0.4991 0.6501 Cpro_riboseC3endo_O3H_O5P_anti_+sc N3 N base 1 6.4751 -0.4911 0.7044 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4 C base 0 6.2021 -1.8126 0.6363 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5 C base 0 4.8490 -2.2052 0.5305 Cpro_riboseC3endo_O3H_O5P_anti_+sc C6 C base 0 3.9046 -1.2550 0.4858 Cpro_riboseC3endo_O3H_O5P_anti_+sc O2 O base 0 5.8255 1.6776 0.6835 Cpro_riboseC3endo_O3H_O5P_anti_+sc N4 N base 0 7.1951 -2.6720 0.6782 Cpro_riboseC3endo_O3H_O5P_anti_+sc H4A H base 0 . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc H4B H base 0 . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc H5 H base 0 . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc H6 H base 0 . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc C1* C sugar 0 3.2115 1.1287 0.2343 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2* C sugar 0 3.3863 2.3602 1.1255 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3* C sugar 0 1.9353 2.8016 1.3026 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4* C sugar 0 1.2024 1.4726 1.3842 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5* C sugar 0 -0.2577 1.5042 1.0145 Cpro_riboseC3endo_O3H_O5P_anti_+sc O2* O sugar 0 3.9275 1.9365 2.3681 Cpro_riboseC3endo_O3H_O5P_anti_+sc O3* O sugar 0 1.7258 3.6104 2.4424 Cpro_riboseC3endo_O3H_O5P_anti_+sc O4* O sugar 0 1.9219 0.6139 0.4651 Cpro_riboseC3endo_O3H_O5P_anti_+sc O5* O sugar 0 -0.4430 2.1380 -0.2696 Cpro_riboseC3endo_O3H_O5P_anti_+sc HA1* H sugar 0 . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc HA2* H sugar 0 . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc HAO2* H sugar 0 . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc HA3* H sugar 0 . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc HA4* H sugar 0 . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc HA5* H sugar 0 . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc HB5* H sugar 0 . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc P P phosphate 0 0.5679 1.8624 -1.4695 Cpro_riboseC3endo_O3H_O5P_anti_+sc O1P O phosphate 0 0.0986 0.7168 -2.2893 Cpro_riboseC3endo_O3H_O5P_anti_+sc O2P O phosphate -1 1.9693 1.8736 -0.9785 Cpro_riboseC3endo_O3H_O5P_anti_+sc O O phosphate -1 0.4340 3.0732 -2.3187 # loop_ _chem_comp_chir.comp_id _chem_comp_chir.id _chem_comp_chir.atom_id _chem_comp_chir.number_atoms_all _chem_comp_chir.number_atoms_nh _chem_comp_chir.volume_flag _chem_comp_chir.volume_three _chem_comp_chir.volume_three_esd _chem_comp_chir.ndb_plane_flag _chem_comp_chir.ndb_plane_three _chem_comp_chir.ndb_plane_three_esd Cpro_riboseC3endo_O3H_O5P_anti_+sc 1 C1* 4 3 sign 2.46 0.06 sign 53.98 1.12 Cpro_riboseC3endo_O3H_O5P_anti_+sc 2 C2* 4 3 sign -2.78 0.05 sign -58.69 1.70 Cpro_riboseC3endo_O3H_O5P_anti_+sc 3 C3* 4 3 sign -2.50 0.08 sign -51.22 2.20 Cpro_riboseC3endo_O3H_O5P_anti_+sc 4 C4* 4 3 sign 2.49 0.06 sign 50.79 1.30 # loop_ _chem_comp_chir_atom.chir_id _chem_comp_chir_atom.enum _chem_comp_chir_atom.comp_id _chem_comp_chir_atom.atom_id 1 1 Cpro_riboseC3endo_O3H_O5P_anti_+sc O4* 1 2 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2* 1 3 Cpro_riboseC3endo_O3H_O5P_anti_+sc N 2 1 Cpro_riboseC3endo_O3H_O5P_anti_+sc C1* 2 2 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3* 2 3 Cpro_riboseC3endo_O3H_O5P_anti_+sc O2* 3 1 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2* 3 2 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4* 3 3 Cpro_riboseC3endo_O3H_O5P_anti_+sc O3* 4 1 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3* 4 2 Cpro_riboseC3endo_O3H_O5P_anti_+sc O4* 4 3 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5* # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.value_dist _chem_comp_bond.value_dist_esd Cpro_riboseC3endo_O3H_O5P_anti_+sc N1 C2 sing 1.3798 0.0117 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2 N3 sing 1.3755 0.0161 Cpro_riboseC3endo_O3H_O5P_anti_+sc N3 C4 doub 1.3515 0.0082 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4 C5 sing 1.4131 0.0072 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5 C6 doub 1.3401 0.0101 Cpro_riboseC3endo_O3H_O5P_anti_+sc C6 N1 sing 1.3673 0.0094 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2 O2 doub 1.2171 0.0128 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4 N4 sing 1.3140 0.0127 Cpro_riboseC3endo_O3H_O5P_anti_+sc N4 H4A sing . . Cpro_riboseC3endo_O3H_O5P_anti_+sc N4 H4B sing . . Cpro_riboseC3endo_O3H_O5P_anti_+sc C5 H5 sing . . Cpro_riboseC3endo_O3H_O5P_anti_+sc C6 H6 sing . . Cpro_riboseC3endo_O3H_O5P_anti_+sc C1* C2* sing 1.5301 0.0131 Cpro_riboseC3endo_O3H_O5P_anti_+sc C1* HA1* sing 1.516 0.008 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2* C3* sing 1.5271 0.0074 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2* HA2* sing 1.516 0.008 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3* C4* sing 1.5196 0.0121 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3* HA3* sing 1.516 0.008 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4* O4* sing 1.4489 0.0094 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4* HA4* sing 1.516 0.008 Cpro_riboseC3endo_O3H_O5P_anti_+sc O4* C1* sing 1.4076 0.0078 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2* O2* sing 1.4201 0.0094 Cpro_riboseC3endo_O3H_O5P_anti_+sc O2* HAO2* sing 1.435 0.013 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3* O3* sing 1.4132 0.0049 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5* C4* sing 1.5065 0.0081 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5* O5* sing 1.4439 0.0100 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5* HA5* sing 1.516 0.008 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5* HB5* sing 1.516 0.008 Cpro_riboseC3endo_O3H_O5P_anti_+sc P O1P doub 1.485 0.017 Cpro_riboseC3endo_O3H_O5P_anti_+sc P O2P sing 1.485 0.017 Cpro_riboseC3endo_O3H_O5P_anti_+sc P O sing 1.485 0.017 # loop_ _chem_link_bond.link_id _chem_link_bond.atom_id_1 _chem_link_bond.atom_id_2 _chem_link_bond.atom_1_comp_id _chem_link_bond.atom_2_comp_id _chem_link_bond.value_order _chem_link_bond.value_dist _chem_link_bond.value_dist_esd ribose_pyrimidine C1* N1 1 2 sing 1.4865 0.0089 ribose_O5_PO4 P O5* 2 1 sing 1.593 0.010 # loop_ _chem_comp_angle.comp_id _chem_comp_angle.atom_id_1 _chem_comp_angle.atom_id_2 _chem_comp_angle.atom_id_3 _chem_comp_angle.value_angle _chem_comp_angle.value_angle_esd _chem_comp_angle.value_dist _chem_comp_angle.value_dist_esd Cpro_riboseC3endo_O3H_O5P_anti_+sc C6 N1 C2 121.38 0.82 2.40 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc N1 C2 N3 115.77 1.99 2.33 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2 N3 C4 124.27 2.11 2.41 0.04 Cpro_riboseC3endo_O3H_O5P_anti_+sc N3 C4 C5 118.03 1.57 2.37 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4 C5 C6 118.65 0.86 2.37 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5 C6 N1 121.81 0.84 2.37 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc N1 C2 O2 122.57 1.72 2.28 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc N3 C2 O2 121.64 0.79 2.26 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc N3 C4 N4 119.01 0.99 2.30 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5 C4 N4 122.95 1.23 2.40 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C1* C2* C3* 101.03 0.80 2.36 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2* C3* C4* 102.21 1.01 2.37 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3* C4* O4* 104.10 0.66 2.34 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4* O4* C1* 109.97 0.70 2.34 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc O4* C1* C2* 107.59 0.65 2.37 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C1* C2* O2* 108.24 1.82 2.39 0.03 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3* C2* O2* 110.24 1.94 2.42 0.03 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2* C3* O3* 113.59 1.53 2.46 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4* C3* O3* 112.68 1.76 2.44 0.03 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5* C4* C3* 115.79 1.39 2.56 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5* C4* O4* 109.78 1.07 2.42 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc O5* C5* C4* 110.66 2.05 2.41 0.03 Cpro_riboseC3endo_O3H_O5P_anti_+sc O1P P O2P 119.6 1.5 . . Cpro_riboseC3endo_O3H_O5P_anti_+sc O1P P O 108.3 3.2 . . Cpro_riboseC3endo_O3H_O5P_anti_+sc O2P P O 107.3 3.2 . . # loop_ _chem_link_angle.link_id _chem_link_angle.atom_id_1 _chem_link_angle.atom_id_2 _chem_link_angle.atom_id_3 _chem_link_angle.atom_1_comp_id _chem_link_angle.atom_2_comp_id _chem_link_angle.atom_3_comp_id _chem_link_angle.value_angle _chem_link_angle.value_angle_esd _chem_link_angle.value_dist _chem_link_angle.value_dist_esd ribose_pyrimidine C2 N1 C1* 2 2 1 116.62 0.88 2.4400 0.0200 ribose_pyrimidine C6 N1 C1* 2 2 1 122.40 0.89 2.5000 0.0100 ribose_pyrimidine N1 C1* C2* 2 1 1 111.65 0.94 2.5000 0.0100 ribose_pyrimidine N1 C1* O4* 2 1 1 108.88 0.43 2.3600 0.0100 ribose_O5_PO4 P O5* C5* 2 1 1 120.9 1.6 . . ribose_O5_PO4 O1P P O5* 2 2 1 110.7 1.2 . . ribose_O5_PO4 O2P P O5* 2 2 1 110.7 1.2 . . ribose_O5_PO4 O P O5* 2 2 1 104.0 1.9 . . # loop_ _chem_comp_tor.comp_id _chem_comp_tor.id _chem_comp_tor.atom_id_1 _chem_comp_tor.atom_id_2 _chem_comp_tor.atom_id_3 _chem_comp_tor.atom_id_4 Cpro_riboseC3endo_O3H_O5P_anti_+sc N1-C2-N3-C4 N1 C2 N3 C4 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2-N3-C4-C5 C2 N3 C4 C5 Cpro_riboseC3endo_O3H_O5P_anti_+sc N3-C4-C5-C6 N3 C4 C5 C6 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4-C5-C6-N1 C4 C5 C6 N1 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5-C6-N1-C2 C5 C6 N1 C2 Cpro_riboseC3endo_O3H_O5P_anti_+sc C6-N1-C2-N3 C6 N1 C2 N3 Cpro_riboseC3endo_O3H_O5P_anti_+sc C6-N1-C2-O2 C6 N1 C2 O2 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4-N3-C2-O2 C4 N3 C2 O2 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2-N3-C4-N4 C2 N3 C4 N4 Cpro_riboseC3endo_O3H_O5P_anti_+sc C6-C5-C4-N4 C6 C5 C4 N4 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4*-O4*-C1*-C2* C4* O4* C1* C2* Cpro_riboseC3endo_O3H_O5P_anti_+sc O4*-C1*-C2*-C3* O4* C1* C2* C3* Cpro_riboseC3endo_O3H_O5P_anti_+sc C1*-C2*-C3*-C4* C1* C2* C3* C4* Cpro_riboseC3endo_O3H_O5P_anti_+sc C2*-C3*-C4*-O4* C2* C3* C4* O4* Cpro_riboseC3endo_O3H_O5P_anti_+sc C3*-C4*-O4*-C1* C3* C4* O4* C1* Cpro_riboseC3endo_O3H_O5P_anti_+sc C2*-C3*-C4*-C5* C2* C3* C4* C5* Cpro_riboseC3endo_O3H_O5P_anti_+sc C3*-C4*-C5*-O5* C3* C4* C5* O5* Cpro_riboseC3endo_O3H_O5P_anti_+sc O3*-C3*-C4*-C5* O3* C3* C4* C5* Cpro_riboseC3endo_O3H_O5P_anti_+sc O4*-C4*-C3*-O3* O4* C4* C3* O3* Cpro_riboseC3endo_O3H_O5P_anti_+sc O4*-C4*-C5*-O5* O4* C4* C5* O5* Cpro_riboseC3endo_O3H_O5P_anti_+sc C5*-C4*-O4*-C1* C5* C4* O4* C1* Cpro_riboseC3endo_O3H_O5P_anti_+sc C1*-C2*-C3*-O3* C1* C2* C3* O3* Cpro_riboseC3endo_O3H_O5P_anti_+sc O3*-C3*-C2*-O2* O3* C3* C2* O2* # _chem_link_tor.link_id ribose_pyrimidine _chem_link_tor.id chi_anti_C3endo_pyrimidine _chem_link_tor.atom_id_1 O4* _chem_link_tor.atom_id_2 C1* _chem_link_tor.atom_id_3 N1 _chem_link_tor.atom_id_4 C2 _chem_link_tor.atom_1_comp_id 1 _chem_link_tor.atom_2_comp_id 1 _chem_link_tor.atom_3_comp_id 2 _chem_link_tor.atom_4_comp_id 2 # loop_ _chem_comp_tor_value.comp_id _chem_comp_tor_value.tor_id _chem_comp_tor_value.angle _chem_comp_tor_value.angle_esd _chem_comp_tor_value.dist _chem_comp_tor_value.dist_esd Cpro_riboseC3endo_O3H_O5P_anti_+sc N1-C2-N3-C4 1.42 2.24 2.74 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2-N3-C4-C5 358.63 2.10 2.79 0.03 Cpro_riboseC3endo_O3H_O5P_anti_+sc N3-C4-C5-C6 0.80 2.11 2.69 0.03 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4-C5-C6-N1 359.60 1.10 2.74 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5-C6-N1-C2 0.48 1.66 2.79 0.03 Cpro_riboseC3endo_O3H_O5P_anti_+sc C6-N1-C2-N3 359.07 2.58 2.69 0.03 Cpro_riboseC3endo_O3H_O5P_anti_+sc C6-N1-C2-O2 178.69 2.43 3.51 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4-N3-C2-O2 181.78 2.33 3.51 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2-N3-C4-N4 178.99 2.06 3.59 0.03 Cpro_riboseC3endo_O3H_O5P_anti_+sc C6-C5-C4-N4 180.44 2.01 3.59 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4*-O4*-C1*-C2* 3.53 4.87 2.37 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc O4*-C1*-C2*-C3* 334.37 3.95 2.34 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C1*-C2*-C3*-C4* 36.70 2.48 2.34 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2*-C3*-C4*-O4* 324.20 2.68 2.37 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3*-C4*-O4*-C1* 20.45 4.27 2.36 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2*-C3*-C4*-C5* 203.61 2.82 3.74 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3*-C4*-C5*-O5* 52.19 4.95 2.93 0.07 Cpro_riboseC3endo_O3H_O5P_anti_+sc O3*-C3*-C4*-C5* 81.27 3.80 3.23 0.03 Cpro_riboseC3endo_O3H_O5P_anti_+sc O4*-C4*-C3*-O3* 201.87 3.83 3.60 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc O4*-C4*-C5*-O5* 293.22 4.75 2.91 0.07 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5*-C4*-O4*-C1* 145.01 4.68 3.57 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C1*-C2*-C3*-O3* 158.39 3.34 3.64 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc O3*-C3*-C2*-O2* 44.06 3.47 2.77 0.05 # _chem_link_tor_value.link_id ribose_pyrimidine _chem_link_tor_value.tor_id chi_anti_C3endo_pyrimidine _chem_link_tor_value.angle 193.3 _chem_link_tor_value.angle_esd 14.0 _chem_link_tor_value.dist . _chem_link_tor_value.dist_esd . # loop_ _ndb_chem_comp_bond.comp_id _ndb_chem_comp_bond.atom_id_1 _ndb_chem_comp_bond.atom_id_2 _ndb_chem_comp_bond.csd_bond_order _ndb_chem_comp_bond.dbsearch_id _ndb_chem_comp_bond.value_dist_calc _ndb_chem_comp_bond.value_dist _ndb_chem_comp_bond.value_dist_delta Cpro_riboseC3endo_O3H_O5P_anti_+sc N1 C2 '1,2,5 ' cyt_pro 1.3801 1.3798 -0.0003 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2 N3 '1,2,5 ' cyt_pro 1.3749 1.3755 0.0006 Cpro_riboseC3endo_O3H_O5P_anti_+sc N3 C4 '1,2,5 ' cyt_pro 1.3512 1.3515 0.0003 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4 C5 '1,2,5 ' cyt_pro 1.4129 1.4131 0.0002 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5 C6 '1,2,5 ' cyt_pro 1.3404 1.3401 -0.0003 Cpro_riboseC3endo_O3H_O5P_anti_+sc C6 N1 '1,2,5 ' cyt_pro 1.3677 1.3673 -0.0004 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2 O2 '1,2,5 ' cyt_pro 1.2172 1.2171 -0.0001 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4 N4 '1,2,5 ' cyt_pro 1.3139 1.3140 0.0001 Cpro_riboseC3endo_O3H_O5P_anti_+sc N4 H4A 1 cyt_pro . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc N4 H4B 1 cyt_pro . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc C5 H5 1 cyt_pro . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc C6 H6 1 cyt_pro . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc C1* C2* 1 ribose 1.5301 1.5301 0.0000 Cpro_riboseC3endo_O3H_O5P_anti_+sc C1* HA1* 1 ribose . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc C2* C3* 1 ribose 1.5270 1.5271 0.0001 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2* HA2* 1 ribose . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc C3* C4* 1 ribose 1.5199 1.5196 -0.0003 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3* HA3* 1 ribose . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc C4* O4* 1 ribose 1.4490 1.4489 -0.0001 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4* HA4* 1 ribose . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc O4* C1* 1 ribose 1.4075 1.4076 0.0001 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2* O2* 1 ribose 1.4200 1.4201 0.0001 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2* HAO2* 1 ribose . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc C3* O3* '1 A' ribose_C3endo_O3H 1.4132 1.4132 0.0000 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5* C4* 1 ribose 1.5065 1.5065 0.0000 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5* O5* '1 A' ribose_O5P 1.4439 1.4439 0.0000 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5* HA5* 1 ribose . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc C5* HB5* 1 ribose . . . Cpro_riboseC3endo_O3H_O5P_anti_+sc P O1P 1 PO4_1 1.4849 1.4850 0.0001 Cpro_riboseC3endo_O3H_O5P_anti_+sc P O2P 1 PO4_1 1.4850 1.4850 0.0000 Cpro_riboseC3endo_O3H_O5P_anti_+sc P O 1 PO4_1 1.4850 1.4850 0.0000 # loop_ _ndb_chem_link_bond.link_id _ndb_chem_link_bond.dbsearch_id _ndb_chem_link_bond.atom_id_1 _ndb_chem_link_bond.atom_id_2 _ndb_chem_link_bond.atom_1_comp_id _ndb_chem_link_bond.atom_2_comp_id _ndb_chem_link_bond.value_dist_calc _ndb_chem_link_bond.value_dist _ndb_chem_link_bond.value_dist_delta ribose_pyrimidine ribose_C3endo_pyrimidine C1* N1 1 2 1.4865 1.4865 0.0000 ribose_O5_PO4 phosphate_O5_1 P O5* 2 1 1.5930 1.5930 0.0000 # loop_ _ndb_chem_comp_angle.comp_id _ndb_chem_comp_angle.atom_id_1 _ndb_chem_comp_angle.atom_id_2 _ndb_chem_comp_angle.atom_id_3 _ndb_chem_comp_angle.dbsearch_id _ndb_chem_comp_angle.value_angle_calc _ndb_chem_comp_angle.value_angle _ndb_chem_comp_angle.value_angle_delta Cpro_riboseC3endo_O3H_O5P_anti_+sc C6 N1 C2 cyt_pro 121.05 121.38 0.33 Cpro_riboseC3endo_O3H_O5P_anti_+sc N1 C2 N3 cyt_pro 116.07 115.77 -0.30 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2 N3 C4 cyt_pro 124.23 124.27 0.04 Cpro_riboseC3endo_O3H_O5P_anti_+sc N3 C4 C5 cyt_pro 117.97 118.03 0.06 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4 C5 C6 cyt_pro 118.71 118.65 -0.06 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5 C6 N1 cyt_pro 121.96 121.81 -0.15 Cpro_riboseC3endo_O3H_O5P_anti_+sc N1 C2 O2 cyt_pro 122.33 122.57 0.24 Cpro_riboseC3endo_O3H_O5P_anti_+sc N3 C2 O2 cyt_pro 121.60 121.64 0.04 Cpro_riboseC3endo_O3H_O5P_anti_+sc N3 C4 N4 cyt_pro 119.04 119.01 -0.03 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5 C4 N4 cyt_pro 122.99 122.95 -0.04 Cpro_riboseC3endo_O3H_O5P_anti_+sc C1* C2* C3* ribose 101.05 101.03 -0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2* C3* C4* ribose 102.22 102.21 -0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3* C4* O4* ribose 104.16 104.10 -0.06 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4* O4* C1* ribose 110.01 109.97 -0.04 Cpro_riboseC3endo_O3H_O5P_anti_+sc O4* C1* C2* ribose 107.67 107.59 -0.08 Cpro_riboseC3endo_O3H_O5P_anti_+sc C1* C2* O2* ribose 108.24 108.24 0.00 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3* C2* O2* ribose 110.29 110.24 -0.05 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2* C3* O3* ribose 113.57 113.59 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4* C3* O3* ribose 112.69 112.68 -0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5* C4* C3* ribose 115.83 115.79 -0.04 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5* C4* O4* ribose 109.76 109.78 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc O5* C5* C4* ribose 110.60 110.66 0.06 Cpro_riboseC3endo_O3H_O5P_anti_+sc O1P P O2P PO4_1 119.12 119.60 0.48 Cpro_riboseC3endo_O3H_O5P_anti_+sc O1P P O PO4_1 106.55 108.30 1.75 Cpro_riboseC3endo_O3H_O5P_anti_+sc O2P P O PO4_1 105.55 107.30 1.75 # loop_ _ndb_chem_link_angle.link_id _ndb_chem_link_angle.dbsearch_id _ndb_chem_link_angle.atom_id_1 _ndb_chem_link_angle.atom_id_2 _ndb_chem_link_angle.atom_id_3 _ndb_chem_link_angle.atom_1_comp_id _ndb_chem_link_angle.atom_2_comp_id _ndb_chem_link_angle.atom_3_comp_id _ndb_chem_link_angle.value_angle_calc _ndb_chem_link_angle.value_angle _ndb_chem_link_angle.value_angle_delta ribose_pyrimidine ribose_C3endo_pyrimidine C2 N1 C1* 2 2 1 115.9801 116.6200 0.6399 ribose_pyrimidine ribose_C3endo_pyrimidine C6 N1 C1* 2 2 1 121.8464 122.4000 0.5536 ribose_pyrimidine ribose_C3endo_pyrimidine N1 C1* C2* 2 1 1 111.7357 111.6500 -0.0857 ribose_pyrimidine ribose_C3endo_pyrimidine N1 C1* O4* 2 1 1 108.8955 108.8800 -0.0155 ribose_O5_PO4 phosphate_O5_1 P O5* C5* 1 1 2 120.8283 120.9000 0.0717 ribose_O5_PO4 phosphate_O5_1 O5* P O1P 2 2 1 110.4122 110.7000 0.2878 ribose_O5_PO4 phosphate_O5_1 O5* P O2P 2 2 1 110.3982 110.7000 0.3018 ribose_O5_PO4 phosphate_O5_1 O P O5* 2 2 1 103.4451 104.0000 0.5549 # loop_ _ndb_chem_comp_tor.comp_id _ndb_chem_comp_tor.id _ndb_chem_comp_tor.dbsearch_id _ndb_chem_comp_tor.value_angle_calc _ndb_chem_comp_tor.value_angle _ndb_chem_comp_tor.value_angle_delta Cpro_riboseC3endo_O3H_O5P_anti_+sc N1-C2-N3-C4 cyt_pro 1.39 1.42 0.03 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2-N3-C4-C5 cyt_pro 358.62 358.63 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc N3-C4-C5-C6 cyt_pro 0.83 0.80 -0.03 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4-C5-C6-N1 cyt_pro 359.61 359.60 -0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5-C6-N1-C2 cyt_pro 0.43 0.48 0.05 Cpro_riboseC3endo_O3H_O5P_anti_+sc C6-N1-C2-N3 cyt_pro 359.13 359.07 -0.06 Cpro_riboseC3endo_O3H_O5P_anti_+sc C6-N1-C2-O2 cyt_pro 178.72 178.69 -0.03 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4-N3-C2-O2 cyt_pro 181.80 181.78 -0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2-N3-C4-N4 cyt_pro 178.99 178.99 0.00 Cpro_riboseC3endo_O3H_O5P_anti_+sc C6-C5-C4-N4 cyt_pro 180.44 180.44 0.00 Cpro_riboseC3endo_O3H_O5P_anti_+sc C4*-O4*-C1*-C2* ribose 3.68 3.53 -0.15 Cpro_riboseC3endo_O3H_O5P_anti_+sc O4*-C1*-C2*-C3* ribose 334.22 334.37 0.15 Cpro_riboseC3endo_O3H_O5P_anti_+sc C1*-C2*-C3*-C4* ribose 36.79 36.70 -0.09 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2*-C3*-C4*-O4* ribose 324.19 324.20 0.01 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3*-C4*-O4*-C1* ribose 20.37 20.45 0.08 Cpro_riboseC3endo_O3H_O5P_anti_+sc C2*-C3*-C4*-C5* ribose 203.56 203.61 0.05 Cpro_riboseC3endo_O3H_O5P_anti_+sc C3*-C4*-C5*-O5* all_ribose_gamma 51.63 52.19 0.56 Cpro_riboseC3endo_O3H_O5P_anti_+sc O3*-C3*-C4*-C5* ribose 81.29 81.27 -0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc O4*-C4*-C3*-O3* ribose 201.92 201.87 -0.05 Cpro_riboseC3endo_O3H_O5P_anti_+sc O4*-C4*-C5*-O5* all_ribose_gamma 294.06 293.22 -0.84 Cpro_riboseC3endo_O3H_O5P_anti_+sc C5*-C4*-O4*-C1* ribose 144.99 145.01 0.02 Cpro_riboseC3endo_O3H_O5P_anti_+sc C1*-C2*-C3*-O3* ribose 158.46 158.39 -0.07 Cpro_riboseC3endo_O3H_O5P_anti_+sc O3*-C3*-C2*-O2* ribose 44.11 44.06 -0.05 # _ndb_chem_link_tor.link_id ribose_pyrimidine _ndb_chem_link_tor.id chi_anti_C3endo_pyrimidine _ndb_chem_link_tor.dbsearch_id C3endo_pyrimidine_anti _ndb_chem_link_tor.value_angle_calc 193.38 _ndb_chem_link_tor.value_angle 193.30 _ndb_chem_link_tor.value_angle_delta -0.08 # loop_ _ndb_dbitem.id _ndb_dbitem.dbsearch_id _ndb_dbitem.molecule_id _ndb_dbitem.r_factor _ndb_dbitem.sigma _ndb_dbitem.compound _ndb_dbitem.citation aracyp cyt_pro 1 3.40 0.001-0.005A ;ARABINOSYL-CYTIDINE-2',5'-CYCLIC PHOSPHATE ; 'W.KUNG,R.E.MARSH,M.KAINOSHO 1977, J.AM.CHEM.SOC., 99, 5471' arfcyt10 cyt_pro 1 2.20 0.001-0.005A '1-(BETA-D-ARABINOFURANOSYL)CYTOSINE HYDROCHLORIDE (ABSOLUTE CONFIGURATION)' 'J.S.SHERFINSKI,R.E.MARSH 1973, ACTA CRYSTALLOGR.,SECT.B, 29, 192' bzcytn cyt_pro 1 4.60 0.001-0.005A '1-BENZYLCYTOSINE NITRATE' ;M.ROSSI,J.P.CARADONNA,L.G.MARZILLI,T.J.KISTENMACHER 1979, ADV.MOL.RELAX.INT.PROC., 15, 103 ; cyticl cyt_pro 1 2.80 0.001-0.005A 'CYTIDINIUM CHLORIDE' 'A.MOSSET,J.J.BONNET,J.GALY 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1908' cytidn cyt_pro 1 2.60 0.006-0.010A 'CYTIDINIUM NITRATE' ;J.J.GUY,L.R.NASSIMBENI,G.M.SHELDRICK,R.TAYLOR 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 2909 ; dinyii10 cyt_pro 1 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' dinyii10 cyt_pro 2 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' docytc cyt_pro 1 3.50 0.001-0.005A ;2'-DEOXYCYTIDINE HYDROCHLORIDE (ABSOLUTE CONFIGURATION) ; 'E.SUBRAMANIAN,D.J.HUNT 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 303' jibdih cyt_pro 1 3.00 0.001-0.005A ;2'-DEOXYCYTIDINIUM DIHYDROGENPHOSPHATE ; 'M.JASKOLSKI 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 153' kogbox cyt_pro 1 3.10 0.001-0.005A ;2'-DEOXY-2'-METHYLIDENECYTIDINE HYDROCHLORIDE (POTENT ANTICANCER ACTIVITY IN CULTURE AND IN TUMOUR-BEARING MICE) ; ;TAI-SHUN LIN,MEI-ZHEN LUO,MAO-CHIN LIU,R.H.CLARKE-KATZENBURG,YUNG-CHI CHENG,W.H.PRUSOFF,W.R.MANCINI,G.I.BIRNBAUM,E.J.GABE,J.GIZIEWICZ 1991, J.MED.CHEM., 34, 2607 ; kogbox01 cyt_pro 1 4.50 0.006-0.010A ;2'-DEOXY-2'-METHYLIDENECYTIDINIUM CHLORIDE (POTENT INHIBITORY AGENT OF THE GROWTH OF TUMOUR CELLS) ; ;Y.YAMAGATA,K.TOMITA,N.MARUBAYASHI,I.UEDA,S.SAKATA,A.MATSUDA,K.TAKENUKI,T.UEDA 1992, NUCLEOSIDES AND NUCLEOTIDES, 11, 835 ; mectsi cyt_pro 1 4.50 0.001-0.005A 'BIS(1-METHYLCYTOSINE) BIS(1-METHYLCYTOSINIUM) HEXAFLUOROSILICATE DIHYDRATE' ;T.J.KISTENMACHER,M.ROSSI,C.C.CHIANG,J.P.CARADONNA,L.G.MARZILLI 1980, ADV.MOL.RELAX.INT.PROC., 17, 113 ; mectsi cyt_pro 2 4.50 0.001-0.005A 'BIS(1-METHYLCYTOSINE) BIS(1-METHYLCYTOSINIUM) HEXAFLUOROSILICATE DIHYDRATE' ;T.J.KISTENMACHER,M.ROSSI,C.C.CHIANG,J.P.CARADONNA,L.G.MARZILLI 1980, ADV.MOL.RELAX.INT.PROC., 17, 113 ; poggat cyt_pro 1 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat cyt_pro 2 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat cyt_pro 3 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat cyt_pro 4 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; vuymad cyt_pro 1 2.90 0.001-0.005A 'CYTIDINIUM DIHYDROGENPHOSPHATE' 'M.JASKOLSKI 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 85' xfurcc10 cyt_pro 1 3.40 0.001-0.005A '1-ALPHA-D-XYLOFURANOSYL-CYTOSINE HYDROCHLORIDE' 'M.L.POST,C.P.HUBER,G.I.BIRNBAUM,D.SHUGAR 1981, CAN.J.CHEM., 59, 238' yidkif cyt_pro 1 2.97 0.001-0.005A 'BIS(CYTIDINIUM) SULFATE' 'M.GILSKI,M.JASKOLSKI 1993, POL.J.CHEM., 67, 1841' yidkif cyt_pro 2 2.97 0.001-0.005A 'BIS(CYTIDINIUM) SULFATE' 'M.GILSKI,M.JASKOLSKI 1993, POL.J.CHEM., 67, 1841' adenos01 ribose 1 4.40 0.001-0.005A 'ADENOSINE (NEUTRON DIFFRACTION AT 123 DEG.K)' ;W.T.KLOOSTER,J.R.RUBLE,B.M.CRAVEN,R.K.MCMULLAN 1991, ACTA CRYSTALLOGR.,SECT.B (STR.SCI.), 47, 376 ; admpot10 ribose 1 2.90 0.001-0.005A ;ADENOSINE-5'-METHYLPHOSPHONATE HEMIHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1724' adposd ribose 1 4.30 0.006-0.010A ;ADENOSINE-3'-PHOSPHATE DIHYDRATE ; 'M.SUNDARALINGAM 1966, ACTA CRYSTALLOGR., 21, 495' adypur10 ribose 2 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; adypur10 ribose 3 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; adypur10 ribose 4 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; apapad10 ribose 1 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' apapad10 ribose 2 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' apapad10 ribose 3 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' beurid10 ribose 1 3.30 0.001-0.005A URIDINE ;E.A.GREEN,R.D.ROSENSTEIN,R.SHIONO,D.J.ABRAHAM,B.L.TRUS,R.E.MARSH 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 102 ; beurid10 ribose 2 3.30 0.001-0.005A URIDINE ;E.A.GREEN,R.D.ROSENSTEIN,R.SHIONO,D.J.ABRAHAM,B.L.TRUS,R.E.MARSH 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 102 ; cupyuh ribose 1 3.40 0.001-0.005A 'CYTIDINE-5'-O-DIMETHYLPHOSPHATE' 'R.G.BRENNAN,N.S.KONDO,M.SUNDARALINGAM 1984, NUCLEIC ACIDS RES., 12, 6813' cytidi01 ribose 1 2.87 0.001-0.005A '4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE BETA-CYTIDINE' 'D.L.WARD 1993, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 49, 1789' cytidi02 ribose 1 5.40 0.001-0.005A 'BETA-CYTIDINE (AT 123 DEG.K, HIGH RESOLUTION REFINEMENT.)' 'LIRONG CHEN,B.M.CRAVEN 1995, ACTA CRYSTALLOGR.,SECT.B (STR.SCI.), 51, 1081' cytidn ribose 1 2.60 0.006-0.010A 'CYTIDINIUM NITRATE' ;J.J.GUY,L.R.NASSIMBENI,G.M.SHELDRICK,R.TAYLOR 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 2909 ; gaknov ribose 1 4.20 0.001-0.005A '3-BETA-D-RIBOFURANOSYLADENINE 3-ISOADENOSINE' ;S.KUMAR,S.R.WILSON,N.J.LEONARD 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 508 ; guanph01 ribose 1 3.00 0.001-0.005A ;GUANOSINE-5'-MONOPHOSPHATE TRIHYDRATE (REDETERMINATION OF MURAYAMA ET AL,ACTA CRYST.,B25,2236,1969) ; 'J.EMERSON,M.SUNDARALINGAM 1980, ACTA CRYSTALLOGR.,SECT.B, 36, 1510' hifkem ribose 1 3.60 0.006-0.010A ;TETRASODIUM P,P''-BIS(5'-ADENOSYL)TETRAPHOSPHATE DODECAHYDRATE ; ;D.WATANABE,M.ISHIKAWA,M.YAMASAKI,M.OZAKI,T.KATAYAMA,H.NAKAJIMA 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 338 ; hifkem ribose 2 3.60 0.006-0.010A ;TETRASODIUM P,P''-BIS(5'-ADENOSYL)TETRAPHOSPHATE DODECAHYDRATE ; ;D.WATANABE,M.ISHIKAWA,M.YAMASAKI,M.OZAKI,T.KATAYAMA,H.NAKAJIMA 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 338 ; jucjas ribose 1 6.53 0.006-0.010A '5-CARBOXYMETHYLAMINOMETHYLURIDINE MONOHYDRATE' 'Z.GALDECKI,B.LUCIAK,A.MALKIEWICZ,B.NAWROT 1991, MONATSH.CHEM., 122, 487' meurid ribose 1 7.50 0.006-0.010A '5-METHYLURIDINE HEMIHYDRATE' 'D.J.HUNT,E.SUBRAMANIAN 1969, ACTA CRYSTALLOGR.,SECT.B, 25, 2144' mxurid01 ribose 1 3.10 0.001-0.005A 5-METHOXYURIDINE 'G.I.BIRNBAUM,W.J.P.BLONSKI,F.E.HRUSKA 1983, CAN.J.CHEM., 61, 2299' pucglr10 ribose 1 4.60 0.006-0.010A N-6--(N-GLYCYLCARBONYL)ADENOSINE 'R.PARTHASARATHY,J.M.OHRT,G.B.CHHEDA 1977, BIOCHEMISTRY, 16, 4999' taljar ribose 1 3.60 0.001-0.005A '4-AMINO-5-METHYL-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE 5-METHYLCYTIDINE' ;N.PADMAJA,S.RAMAKUMAR,M.A.VISWAMITRA 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 1445 ; taljar ribose 2 3.60 0.001-0.005A '4-AMINO-5-METHYL-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE 5-METHYLCYTIDINE' ;N.PADMAJA,S.RAMAKUMAR,M.A.VISWAMITRA 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 1445 ; uroame ribose 1 4.00 0.006-0.010A 'URIDINE-5-OXYACETIC ACID METHYL ESTER MONOHYDRATE' 'K.MORIKAWA,K.TORII,Y.IITAKA,M.TSUBOI 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 1004' adenos01 ribose_C3endo_O3H 1 4.40 0.001-0.005A 'ADENOSINE (NEUTRON DIFFRACTION AT 123 DEG.K)' ;W.T.KLOOSTER,J.R.RUBLE,B.M.CRAVEN,R.K.MCMULLAN 1991, ACTA CRYSTALLOGR.,SECT.B (STR.SCI.), 47, 376 ; admpot10 ribose_C3endo_O3H 1 2.90 0.001-0.005A ;ADENOSINE-5'-METHYLPHOSPHONATE HEMIHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1724' admpot10 ribose_C3endo_O3H 2 2.90 0.001-0.005A ;ADENOSINE-5'-METHYLPHOSPHONATE HEMIHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1724' adypur10 ribose_C3endo_O3H 3 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; adypur10 ribose_C3endo_O3H 4 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; apapad10 ribose_C3endo_O3H 2 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' beurid10 ribose_C3endo_O3H 1 3.30 0.001-0.005A URIDINE ;E.A.GREEN,R.D.ROSENSTEIN,R.SHIONO,D.J.ABRAHAM,B.L.TRUS,R.E.MARSH 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 102 ; beurid10 ribose_C3endo_O3H 2 3.30 0.001-0.005A URIDINE ;E.A.GREEN,R.D.ROSENSTEIN,R.SHIONO,D.J.ABRAHAM,B.L.TRUS,R.E.MARSH 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 102 ; cupyuh ribose_C3endo_O3H 1 3.40 0.001-0.005A 'CYTIDINE-5'-O-DIMETHYLPHOSPHATE' 'R.G.BRENNAN,N.S.KONDO,M.SUNDARALINGAM 1984, NUCLEIC ACIDS RES., 12, 6813' cytidi01 ribose_C3endo_O3H 1 2.87 0.001-0.005A '4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE BETA-CYTIDINE' 'D.L.WARD 1993, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 49, 1789' cytidi02 ribose_C3endo_O3H 1 5.40 0.001-0.005A 'BETA-CYTIDINE (AT 123 DEG.K, HIGH RESOLUTION REFINEMENT.)' 'LIRONG CHEN,B.M.CRAVEN 1995, ACTA CRYSTALLOGR.,SECT.B (STR.SCI.), 51, 1081' cytidn ribose_C3endo_O3H 1 2.60 0.006-0.010A 'CYTIDINIUM NITRATE' ;J.J.GUY,L.R.NASSIMBENI,G.M.SHELDRICK,R.TAYLOR 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 2909 ; gaknov ribose_C3endo_O3H 1 4.20 0.001-0.005A '3-BETA-D-RIBOFURANOSYLADENINE 3-ISOADENOSINE' ;S.KUMAR,S.R.WILSON,N.J.LEONARD 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 508 ; guanph01 ribose_C3endo_O3H 1 3.00 0.001-0.005A ;GUANOSINE-5'-MONOPHOSPHATE TRIHYDRATE (REDETERMINATION OF MURAYAMA ET AL,ACTA CRYST.,B25,2236,1969) ; 'J.EMERSON,M.SUNDARALINGAM 1980, ACTA CRYSTALLOGR.,SECT.B, 36, 1510' hifkem ribose_C3endo_O3H 1 3.60 0.006-0.010A ;TETRASODIUM P,P''-BIS(5'-ADENOSYL)TETRAPHOSPHATE DODECAHYDRATE ; ;D.WATANABE,M.ISHIKAWA,M.YAMASAKI,M.OZAKI,T.KATAYAMA,H.NAKAJIMA 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 338 ; hifkem ribose_C3endo_O3H 2 3.60 0.006-0.010A ;TETRASODIUM P,P''-BIS(5'-ADENOSYL)TETRAPHOSPHATE DODECAHYDRATE ; ;D.WATANABE,M.ISHIKAWA,M.YAMASAKI,M.OZAKI,T.KATAYAMA,H.NAKAJIMA 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 338 ; jucjas ribose_C3endo_O3H 1 6.53 0.006-0.010A '5-CARBOXYMETHYLAMINOMETHYLURIDINE MONOHYDRATE' 'Z.GALDECKI,B.LUCIAK,A.MALKIEWICZ,B.NAWROT 1991, MONATSH.CHEM., 122, 487' meurid ribose_C3endo_O3H 1 7.50 0.006-0.010A '5-METHYLURIDINE HEMIHYDRATE' 'D.J.HUNT,E.SUBRAMANIAN 1969, ACTA CRYSTALLOGR.,SECT.B, 25, 2144' mxurid01 ribose_C3endo_O3H 1 3.10 0.001-0.005A 5-METHOXYURIDINE 'G.I.BIRNBAUM,W.J.P.BLONSKI,F.E.HRUSKA 1983, CAN.J.CHEM., 61, 2299' pucglr10 ribose_C3endo_O3H 1 4.60 0.006-0.010A N-6--(N-GLYCYLCARBONYL)ADENOSINE 'R.PARTHASARATHY,J.M.OHRT,G.B.CHHEDA 1977, BIOCHEMISTRY, 16, 4999' taljar ribose_C3endo_O3H 1 3.60 0.001-0.005A '4-AMINO-5-METHYL-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE 5-METHYLCYTIDINE' ;N.PADMAJA,S.RAMAKUMAR,M.A.VISWAMITRA 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 1445 ; taljar ribose_C3endo_O3H 2 3.60 0.001-0.005A '4-AMINO-5-METHYL-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE 5-METHYLCYTIDINE' ;N.PADMAJA,S.RAMAKUMAR,M.A.VISWAMITRA 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 1445 ; uroame ribose_C3endo_O3H 1 4.00 0.006-0.010A 'URIDINE-5-OXYACETIC ACID METHYL ESTER MONOHYDRATE' 'K.MORIKAWA,K.TORII,Y.IITAKA,M.TSUBOI 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 1004' cekluz ribose_O5P 1 4.90 0.001-0.005A 'DISODIUM URIDINE DIPHOSPHOGLUCOSE DIHYDRATE' 'Y.SUGAWARA,H.IWASAKI 1984, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 40, 389' coczid ribose_O5P 1 3.90 0.001-0.005A 'ADENOSINE-5'-O-DIETHYL-PHOSPHATE' 'R.G.BRENNAN,N.S.KONDO,M.SUNDARALINGAM 1984, J.AM.CHEM.SOC., 106, 5671' daurid01 ribose_O5P 1 3.95 0.001-0.005A ;3',5'-DIACETYLURIDINE (AT -170DEG.C) ; ;R.A.G.DE GRAAFF,G.ADMIRAAL,E.H.KOEN,C.ROMERS 1977, ACTA CRYSTALLOGR.,SECT.B, 33, 2459 ; dotxuf10 ribose_O5P 1 5.70 0.001-0.005A ;TRYPTAMINIUM 7-METHYLGUANOSINE 5'-MONOPHOSPHATE TRIHYDRATE ; 'T.ISHIDA,M.DOI,H.UEDA,M.INOUE,G.M.SHELDRICK 1988, J.AM.CHEM.SOC., 110, 2286' guopna10 ribose_O5P 1 5.60 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 812' guopna10 ribose_O5P 2 5.60 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 812' guopna11 ribose_O5P 1 5.70 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'S.K.KATTI,T.P.SESHADRI,M.A.VISWAMITRA 1981, ACTA CRYSTALLOGR.,SECT.B, 37, 1825' guopna11 ribose_O5P 2 5.70 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'S.K.KATTI,T.P.SESHADRI,M.A.VISWAMITRA 1981, ACTA CRYSTALLOGR.,SECT.B, 37, 1825' suromm ribose_O5P 1 2.50 0.006-0.010A ;SODIUM URIDINE-5'-O-METHYLPHOSPHATE METHANOL SOLVATE ; 'J.D.HOOGENDORP,C.ROMERS 1978, ACTA CRYSTALLOGR.,SECT.B, 34, 2724' admpot10 ribose_O5P 1 2.90 0.001-0.005A ;ADENOSINE-5'-METHYLPHOSPHONATE HEMIHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1724' admpot10 ribose_O5P 2 2.90 0.001-0.005A ;ADENOSINE-5'-METHYLPHOSPHONATE HEMIHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1724' adypur10 ribose_O5P 3 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; adypur10 ribose_O5P 4 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; apapad10 ribose_O5P 1 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' apapad10 ribose_O5P 2 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' cupyuh ribose_O5P 1 3.40 0.001-0.005A 'CYTIDINE-5'-O-DIMETHYLPHOSPHATE' 'R.G.BRENNAN,N.S.KONDO,M.SUNDARALINGAM 1984, NUCLEIC ACIDS RES., 12, 6813' guanph01 ribose_O5P 1 3.00 0.001-0.005A ;GUANOSINE-5'-MONOPHOSPHATE TRIHYDRATE (REDETERMINATION OF MURAYAMA ET AL,ACTA CRYST.,B25,2236,1969) ; 'J.EMERSON,M.SUNDARALINGAM 1980, ACTA CRYSTALLOGR.,SECT.B, 36, 1510' hifkem ribose_O5P 1 3.60 0.006-0.010A ;TETRASODIUM P,P''-BIS(5'-ADENOSYL)TETRAPHOSPHATE DODECAHYDRATE ; ;D.WATANABE,M.ISHIKAWA,M.YAMASAKI,M.OZAKI,T.KATAYAMA,H.NAKAJIMA 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 338 ; hifkem ribose_O5P 2 3.60 0.006-0.010A ;TETRASODIUM P,P''-BIS(5'-ADENOSYL)TETRAPHOSPHATE DODECAHYDRATE ; ;D.WATANABE,M.ISHIKAWA,M.YAMASAKI,M.OZAKI,T.KATAYAMA,H.NAKAJIMA 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 338 ; dinyii10 all_ribose_gamma 1 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' dinyii10 all_ribose_gamma 2 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' dinyii10 all_ribose_gamma 3 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' dinyii10 all_ribose_gamma 4 4.10 0.006-0.010A ;SODIUM BIS(DEOXYCYTIDYLYL-(3'-5')-DEOXYGUANOSINE) DINUCLEOTIDE HEPTAHYDRATE ; 'M.COLL,X.SOLANS,M.FONT-ALTABA,J.A.SUBIRANA 1987, J.BIOMOL.STRUCT.DYN., 4, 797' duhhuj all_ribose_gamma 1 2.70 0.001-0.005A ;5-METHOXYMETHYL-2'-DEOXYURIDINE (ANTIVIRAL AGENT) ; ;O.A.L.EL-KABBANI,I.EKIEL,L.T.J.DELBAERE,G.TOURIGNY,A.L.STUART,S.V.GUPTA 1986, NUCLEOSIDES AND NUCLEOTIDES, 5, 95 ; dumtou all_ribose_gamma 1 4.20 0.001-0.005A (-)-CIS-(5S,6S)-5-HYDROXY-5-METHYL-6-ETHYLAMINO-5,6-DIHYDROTHYMIDINE ;T.HARAYAMA,R.YANADA,T.TAGA,K.MACHIDA,J.CADET,F.YONEDA 1986, J.CHEM.SOC.,CHEM.COMM.,, 1469 ; dumtou10 all_ribose_gamma 1 3.60 0.001-0.005A (5S,6S)-CIS-(+)-6-ETHYLAMINO-5-HYDROXY-5,6-DIHYDROTHYMIDINE ;T.HARAYAMA,R.YANADA,M.TANAKA,T.TAGA,K.MACHIDA,F.YONEDA,J.CADET 1988, J.CHEM.SOC.,PERKIN TRANS.1,, 2555 ; fmdurd02 all_ribose_gamma 1 3.30 0.006-0.010A '5-TRIFLUOROMETHYL-2'-DEOXYURIDINE' 'T.SATO 1989, ANAL.SCI., 5, 117' foylua all_ribose_gamma 1 4.40 0.001-0.005A '3'-O-ACETYL-2'-DEOXYADENOSINE' ;J.N.LOW,P.TOLLIN,R.A.HOWIE 1987, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 43, 2184 ; gexxiq all_ribose_gamma 1 4.90 0.001-0.005A ;3'-O-ACETYLTHYMIDINE (ORTHORHOMBIC FORM) ; ;R.S.ECCLESTON,C.C.WILSON,R.A.HOWIE 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 1424 ; gexxiq01 all_ribose_gamma 1 5.00 0.006-0.010A ;3'-O-ACETYLTHYMIDINE (HEXAGONAL FORM) ; 'A.SCHOUTEN,J.A.KANTERS 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 1320' ipdxur all_ribose_gamma 1 6.10 0.001-0.005A 'BETA-5-ISOPROPYL-2'-DEOXYURIDINE' ;M.CZUGLER,A.KALMAN,J.T.SAGI,A.SZABOLCS,L.OTVOS 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1626 ; ipdxur01 all_ribose_gamma 1 6.10 0.001-0.005A 'BETA-5-ISOPROPYL-2'-DEOXYURIDINE' 'C.MATYAS,K.ALAKOS 1993, ACTA PHARM.HUNG., 63, 193' jafhih all_ribose_gamma 2 3.10 0.001-0.005A ;2'-DEOXY-3',5'-DI-O-ACETYL GUANOSINE ; 'L.H.KOOLE,H.M.BUCK,J.A.KANTERS,A.SCHOUTEN 1988, CAN.J.CHEM., 66, 2634' jibdih all_ribose_gamma 1 3.00 0.001-0.005A ;2'-DEOXYCYTIDINIUM DIHYDROGENPHOSPHATE ; 'M.JASKOLSKI 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 153' jubvor all_ribose_gamma 1 4.37 0.001-0.005A ;1-(2'-DEOXY-BETA-D-RIBOFURANOSYL)-6,7-DIPHENYL-LUMAZINE (AT 183 DEG.K) ; ;XIAODONG CAO,W.PFLEIDERER,H.ROSEMEYER,F.SEELA,W.BANNWARTH,P.SCHONHOLZER 1992, HELV.CHIM.ACTA, 75, 1267 ; keclot all_ribose_gamma 1 4.30 0.006-0.010A ;8-AMINO-3,10-DIHYDRO-10-OXO-3-(BETA-D-2-DEOXYRIBOFURANOSYL)-3H-1,3,5-TRIAZINO(1,2-A)PURINE MONOHYDRATE DIDA'-METAMORPHOSINE MONOHYDRATE ; 'S.KUMAR,F.T.OAKES,S.R.WILSON,N.J.LEONARD 1988, HETEROCYCLES, 27, 2891' poggat all_ribose_gamma 1 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat all_ribose_gamma 2 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat all_ribose_gamma 3 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; poggat all_ribose_gamma 4 4.20 0.006-0.010A ;BIS(2'-DEOXYCYTIDINE) DIHYDROGEN PHOSPHATE ; ;M.JASKOLSKI,M.GDANIEC,M.GILSKI,M.ALEJSKA,M.D.BRATEK-WIEWIOROWSKA 1994, J.BIOMOL.STRUCT.DYN., 11, 1287 ; pryurd10 all_ribose_gamma 1 2.70 0.006-0.010A '5-(2-PROPYNYLOXY)-2'-DEOXYURIDINE' 'G.S.D.KING,L.SENGIER-ROBERTS 1982, J.CHEM.RES., 25, 722' sifkex all_ribose_gamma 1 2.80 0.001-0.005A ;5-((1S,2S)-2-CHLOROCYCLOPROPYL)-1-(2-DEOXY-BETA-D-RIBOFURANOSYL)URACIL (ABSOLUTE CONFIGURATION) ; ;S.C.MOSIMANN,B.D.SANTARSIERO,M.N.G.JAMES,M.TANDON,L.I.WIEBE,E.E.KNAUS 1990, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 46, 2115 ; vexdor all_ribose_gamma 1 4.40 0.001-0.005A ;5-METHOXYMETHYL-2'-DEOXYCYTIDINE (ANTIVIRAL AGENT) MMDCYD ; ;ZONGCHAO JIA,G.TOURIGNY,L.T.J.DELBAERE,A.L.STUART,S.V.GUPTA 1990, CAN.J.CHEM., 68, 836 ; vexdor all_ribose_gamma 2 4.40 0.001-0.005A ;5-METHOXYMETHYL-2'-DEOXYCYTIDINE (ANTIVIRAL AGENT) MMDCYD ; ;ZONGCHAO JIA,G.TOURIGNY,L.T.J.DELBAERE,A.L.STUART,S.V.GUPTA 1990, CAN.J.CHEM., 68, 836 ; zasquf all_ribose_gamma 1 3.80 0.001-0.005A ;3'-O-METHYLTHIOMETHYLTHYMIDINE MONOHYDRATE (POTENTIAL INHIBITORY ACTIVITY AGAINST HIV) ; ;V.A.BOCHKAREV,S.G.ZAVGORODNY,A.S.ZHDANOV,G.V.GURSKAYA 1995, BIOORG.KHIM., 21, 206 ; zasram all_ribose_gamma 1 2.80 0.001-0.005A ;3'-O-METHYLSULFINYLMETHYLTHYMIDINE (POTENTIAL INHIBITORY ACTIVITY AGAINST HIV) ; ;V.A.BOCHKAREV,S.G.ZAVGORODNY,A.S.ZHDANOV,G.V.GURSKAYA 1995, BIOORG.KHIM., 21, 206 ; zedhiz all_ribose_gamma 1 5.40 0.006-0.010A ;(1S,6S)-6,7,7,8,8-PENTAMETHYL-2-(BETA-D-2-DEOXYRIBOFURANOSYL)-CIS-2,4-DIAZABICYCLO(4.2.0)OCTANE-3,5-DIONE ; 'N.HAGA,I.ISHIKAWA,H.TAKAYANAGI,H.OGURA 1994, BULL.CHEM.SOC.JPN., 67, 728' docytc all_ribose_gamma 1 3.50 0.001-0.005A ;2'-DEOXYCYTIDINE HYDROCHLORIDE (ABSOLUTE CONFIGURATION) ; 'E.SUBRAMANIAN,D.J.HUNT 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 303' gidtiw all_ribose_gamma 1 4.20 0.006-0.010A 'N-4--(UREIDOCARBONYL)-2'DEOXYCYTIDINE' 'S.KUMAR,N.J.LEONARD 1988, J.ORG.CHEM., 53, 3959' zozvuf all_ribose_gamma 1 4.56 0.001-0.005A ;(4-AMINO-1-(2-DEOXY-BETA-D-RIBOFURANOSYL)-2-OXO-1H-3-PYRIMIDINIO)(CYANO)BORATE MONOHYDRATE (IN VIVO ANTINEOPLASTIC ACTIVITY AGAINST VARIOUS TUMORS, WITH POTENTIAL USE IN BORON NEUTRON-CAPTURE THERAPY FOR BRAIN CANCER) 2'-DEOXYCYTIDINE-N(3)-CYANOBORANE MONOHYDRATE ; ;P.SINGH,M.ZOTTOLA,SAQING HUANG,B.R.SHAW,L.G.PEDERSEN 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 693 ; acados all_ribose_gamma 1 4.10 0.006-0.010A '3'-O-ACETYLADENOSINE' 'S.T.RAO,M.SUNDARALINGAM 1970, J.AM.CHEM.SOC., 92, 4963' adoshc all_ribose_gamma 1 3.70 0.001-0.005A 'ADENOSINE HYDROCHLORIDE' 'K.SHIKATA,T.UEKI,T.MITSUI 1973, ACTA CRYSTALLOGR.,SECT.B, 29, 31' amurid all_ribose_gamma 1 7.60 0.006-0.010A 5-AMINOURIDINE 'E.EGERT,H.J.LINDNER,W.HILLEN,H.G.GASSEN 1978, ACTA CRYSTALLOGR.,SECT.B, 34, 2204' bibxit all_ribose_gamma 1 5.10 0.006-0.010A '4-AMINO-1-BETA-D-RIBOFURANOSYL-PYRIMIDINE-2,6(1H,3H)-DIONE MONOHYDRATE' 'J.GORSKI,P.TOLLIN 1982, CRYST.STRUCT.COMMUN., 11, 543' bimfei10 all_ribose_gamma 1 3.70 0.001-0.005A 1,N-6--ETHENOADENOSINE 'M.JASKOLSKI 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 3171' bimfim10 all_ribose_gamma 1 4.50 0.001-0.005A '1,N-6--ETHENOADENOSINE HYDROCHLORIDE' 'M.JASKOLSKI 1984, J.CRYSTALLOGR.SPECTROSC.RES., 14, 45' clurid10 all_ribose_gamma 1 3.15 0.001-0.005A 5-CHLOROURIDINE 'S.W.HAWKINSON,C.L.COULTER 1971, ACTA CRYSTALLOGR.,SECT.B, 27, 34' coczid all_ribose_gamma 1 3.90 0.001-0.005A 'ADENOSINE-5'-O-DIETHYL-PHOSPHATE' 'R.G.BRENNAN,N.S.KONDO,M.SUNDARALINGAM 1984, J.AM.CHEM.SOC., 106, 5671' coxnei all_ribose_gamma 1 3.10 0.001-0.005A '8-CHLORO-GUANOSINE DIHYDRATE' 'G.I.BIRNBAUM,P.LASSOTA,D.SHUGAR 1984, BIOCHEMISTRY, 23, 5048' cutvao all_ribose_gamma 1 3.90 0.001-0.005A XANTHOSINE 'B.LESYNG,C.MARCK,W.SAENGER 1984, Z.NATURFORSCH.,TEIL C, 39, 720' cytiac01 all_ribose_gamma 1 7.30 0.006-0.010A ;CYTIDINE-3'-PHOSPHATE (MONOCLINIC FORM) CYTIDYLIC ACID B ; 'C.E.BUGG,R.E.MARSH 1967, J.MOL.BIOL., 25, 67' cyticl all_ribose_gamma 1 2.80 0.001-0.005A 'CYTIDINIUM CHLORIDE' 'A.MOSSET,J.J.BONNET,J.GALY 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1908' demxey all_ribose_gamma 1 5.30 0.006-0.010A '8-METHYLGUANOSINE TRIHYDRATE' ;K.HAMADA,I.HONDA,S.FUJII,T.FUJIWARA,K.-I.TOMITA 1985, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 41, 1486 ; dotxuf10 all_ribose_gamma 1 5.70 0.001-0.005A ;TRYPTAMINIUM 7-METHYLGUANOSINE 5'-MONOPHOSPHATE TRIHYDRATE ; 'T.ISHIDA,M.DOI,H.UEDA,M.INOUE,G.M.SHELDRICK 1988, J.AM.CHEM.SOC., 110, 2286' fucwij all_ribose_gamma 1 4.90 0.001-0.005A 'N-6--DIDEHYDRO-1,6-DIHYDRO-1-METHYLADENOSINE TRIHYDRATE' 'Y.YAMAGATA,K.-I.TOMITA 1987, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 43, 2117' gicmou all_ribose_gamma 1 4.10 0.001-0.005A 'N-4--AMINOCYTIDINE HEMIHYDRATE (MUTAGENIC ACTIVITY)' ;S.KASHINO,K.NEGISHI,H.HAYATSU 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 1454 ; gicmou all_ribose_gamma 2 4.10 0.001-0.005A 'N-4--AMINOCYTIDINE HEMIHYDRATE (MUTAGENIC ACTIVITY)' ;S.KASHINO,K.NEGISHI,H.HAYATSU 1988, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 44, 1454 ; guansh10 all_ribose_gamma 1 3.60 0.001-0.005A 'GUANOSINE DIHYDRATE' 'U.THEWALT,C.E.BUGG,R.E.MARSH 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 1089' guansh10 all_ribose_gamma 2 3.60 0.001-0.005A 'GUANOSINE DIHYDRATE' 'U.THEWALT,C.E.BUGG,R.E.MARSH 1970, ACTA CRYSTALLOGR.,SECT.B, 26, 1089' guopna10 all_ribose_gamma 1 5.60 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 812' guopna10 all_ribose_gamma 2 5.60 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1982, ACTA CRYSTALLOGR.,SECT.B, 38, 812' guopna11 all_ribose_gamma 1 5.70 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'S.K.KATTI,T.P.SESHADRI,M.A.VISWAMITRA 1981, ACTA CRYSTALLOGR.,SECT.B, 37, 1825' guopna11 all_ribose_gamma 2 5.70 0.006-0.010A ;DISODIUM GUANOSINE-5'-PHOSPHATE HEPTAHYDRATE ; 'S.K.KATTI,T.P.SESHADRI,M.A.VISWAMITRA 1981, ACTA CRYSTALLOGR.,SECT.B, 37, 1825' hipads all_ribose_gamma 1 3.10 0.001-0.005A '8-(ALPHA-HYDROXYISOPROPYL)-ADENOSINE DIHYDRATE' 'G.I.BIRNBAUM,D.SHUGAR 1978, BIOCHIM.BIOPHYS.ACTA, 517, 500' hxurid all_ribose_gamma 1 2.60 0.001-0.005A 5-HYDROXYURIDINE 'U.THEWALT,C.E.BUGG 1973, ACTA CRYSTALLOGR.,SECT.B, 29, 1393' jawjia all_ribose_gamma 1 2.96 0.001-0.005A '7-METHYL-8-OXO-7,8-DIHYDROGUANOSINE MONOHYDRATE' ;S.B.LARSON,H.B.COTTAM,R.K.ROBINS 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 1979 ; kehzay all_ribose_gamma 1 2.86 0.001-0.005A ;2-AMINO-7-METHYL-9-(BETA-D-RIBOFURANOSYL)-8(9H)-THIOXOPURIN-6(1H)-ONE MONOHYDRATE (IMMUNE SYSTEM STIMULATORY ACTION) ; ;S.B.LARSON,E.M.HENRY,G.D.KINI,R.K.ROBINS 1990, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 46, 506 ; kurdmp all_ribose_gamma 1 3.50 0.001-0.005A ;POTASSIUM DIHYDROURIDINE-3'-MONOPHOSPHATE HEMIHYDRATE ; 'J.EMERSON,M.SUNDARALINGAM 1980, ACTA CRYSTALLOGR.,SECT.B, 36, 537' lumzrf01 all_ribose_gamma 1 5.90 0.001-0.005A 6,7-DIMETHYL-N-1-BETA-D-RIBOFURANOSYL-LUMAZINE 'W.SAENGER,G.RITZMANN,W.PFLEIDERER 1977, ACTA CRYSTALLOGR.,SECT.B, 33, 2989' lumzrf01 all_ribose_gamma 2 5.90 0.001-0.005A 6,7-DIMETHYL-N-1-BETA-D-RIBOFURANOSYL-LUMAZINE 'W.SAENGER,G.RITZMANN,W.PFLEIDERER 1977, ACTA CRYSTALLOGR.,SECT.B, 33, 2989' pctrib10 all_ribose_gamma 1 4.10 0.001-0.005A N-6--(N-THREONYLCARBONYL)ADENOSINE 'R.PARTHASARATHY,J.M.OHRT,G.B.CHHEDA 1977, BIOCHEMISTRY, 16, 4999' selzis all_ribose_gamma 1 4.10 0.001-0.005A 3-(8-XANTHOSYL)XANTHINE 'XINHUA JI,P.SUBRAMANIAN,D.VAN DER HELM,G.DRYHURST 1990, J.ORG.CHEM., 55, 1291' selzis all_ribose_gamma 2 4.10 0.001-0.005A 3-(8-XANTHOSYL)XANTHINE 'XINHUA JI,P.SUBRAMANIAN,D.VAN DER HELM,G.DRYHURST 1990, J.ORG.CHEM., 55, 1291' uridmp10 all_ribose_gamma 1 5.10 0.006-0.010A ;URIDINE-3'-MONOPHOSPHATE MONOHYDRATE ; 'T.SRIKRISHNAN,S.M.FRIDEY,R.PARTHASARATHY 1979, J.AM.CHEM.SOC., 101, 3739' vuymad all_ribose_gamma 1 2.90 0.001-0.005A 'CYTIDINIUM DIHYDROGENPHOSPHATE' 'M.JASKOLSKI 1989, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 45, 85' yidkif all_ribose_gamma 1 2.97 0.001-0.005A 'BIS(CYTIDINIUM) SULFATE' 'M.GILSKI,M.JASKOLSKI 1993, POL.J.CHEM., 67, 1841' yidkif all_ribose_gamma 2 2.97 0.001-0.005A 'BIS(CYTIDINIUM) SULFATE' 'M.GILSKI,M.JASKOLSKI 1993, POL.J.CHEM., 67, 1841' zaytic all_ribose_gamma 1 3.45 0.001-0.005A '3-METHYLURIDINE (ABSOLUTE CONFIGURATION BY REFINEMENT OF THE FLACK PARAMETER)' ;B.L.PARTRIDGE,C.E.PRITCHARD 1995, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 51, 1929 ; zexwee all_ribose_gamma 1 3.66 0.006-0.010A ;2-CHLORO-N-(1-PHENYL-2(R)-PROPYL)-9-BETA-D-RIBOFURANOSYL-9H-PURIN-6-AMINE (ACTIVATING AGENT OF ADENOSINE A2 RECEPTOR) N-(1-PHENYL-2(R)-PROPYL)-2-CHLORO-ADENOSINE ; 'A.K.DAS,V.BERTOLASI 1995, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 51, 2408' admpot10 all_ribose_gamma 1 2.90 0.001-0.005A ;ADENOSINE-5'-METHYLPHOSPHONATE HEMIHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1724' admpot10 all_ribose_gamma 2 2.90 0.001-0.005A ;ADENOSINE-5'-METHYLPHOSPHONATE HEMIHYDRATE ; 'C.L.BARNES,S.W.HAWKINSON 1979, ACTA CRYSTALLOGR.,SECT.B, 35, 1724' adypur10 all_ribose_gamma 1 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; adypur10 all_ribose_gamma 2 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; adypur10 all_ribose_gamma 3 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; adypur10 all_ribose_gamma 4 5.70 0.006-0.010A ;SODIUM ADENYLYL-(3'-5')-URIDINE DINUCLEOTIDE HEXAHYDRATE ; ;N.C.SEEMAN,J.M.ROSENBERG,F.L.SUDDATH,J.J.P.KIM,A.RICH 1976, J.MOL.BIOL., 104, 109 ; apapad10 all_ribose_gamma 1 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' apapad10 all_ribose_gamma 2 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' apapad10 all_ribose_gamma 3 6.80 0.001-0.005A ;ADENYLYL-(3',5')-ADENYLYL-(3',5')-ADENOSINE TRINUCLEOTIDE HEXAHYDRATE (FORM I) ; 'D.SUCK,P.C.MANOR,W.SAENGER 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 1727' beurid10 all_ribose_gamma 1 3.30 0.001-0.005A URIDINE ;E.A.GREEN,R.D.ROSENSTEIN,R.SHIONO,D.J.ABRAHAM,B.L.TRUS,R.E.MARSH 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 102 ; beurid10 all_ribose_gamma 2 3.30 0.001-0.005A URIDINE ;E.A.GREEN,R.D.ROSENSTEIN,R.SHIONO,D.J.ABRAHAM,B.L.TRUS,R.E.MARSH 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 102 ; cytidi01 all_ribose_gamma 1 2.87 0.001-0.005A '4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE BETA-CYTIDINE' 'D.L.WARD 1993, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 49, 1789' cytidi02 all_ribose_gamma 1 5.40 0.001-0.005A 'BETA-CYTIDINE (AT 123 DEG.K, HIGH RESOLUTION REFINEMENT.)' 'LIRONG CHEN,B.M.CRAVEN 1995, ACTA CRYSTALLOGR.,SECT.B (STR.SCI.), 51, 1081' cytidn all_ribose_gamma 1 2.60 0.006-0.010A 'CYTIDINIUM NITRATE' ;J.J.GUY,L.R.NASSIMBENI,G.M.SHELDRICK,R.TAYLOR 1976, ACTA CRYSTALLOGR.,SECT.B, 32, 2909 ; guanph01 all_ribose_gamma 1 3.00 0.001-0.005A ;GUANOSINE-5'-MONOPHOSPHATE TRIHYDRATE (REDETERMINATION OF MURAYAMA ET AL,ACTA CRYST.,B25,2236,1969) ; 'J.EMERSON,M.SUNDARALINGAM 1980, ACTA CRYSTALLOGR.,SECT.B, 36, 1510' hifkem all_ribose_gamma 1 3.60 0.006-0.010A ;TETRASODIUM P,P''-BIS(5'-ADENOSYL)TETRAPHOSPHATE DODECAHYDRATE ; ;D.WATANABE,M.ISHIKAWA,M.YAMASAKI,M.OZAKI,T.KATAYAMA,H.NAKAJIMA 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 338 ; hifkem all_ribose_gamma 2 3.60 0.006-0.010A ;TETRASODIUM P,P''-BIS(5'-ADENOSYL)TETRAPHOSPHATE DODECAHYDRATE ; ;D.WATANABE,M.ISHIKAWA,M.YAMASAKI,M.OZAKI,T.KATAYAMA,H.NAKAJIMA 1996, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 52, 338 ; jucjas all_ribose_gamma 1 6.53 0.006-0.010A '5-CARBOXYMETHYLAMINOMETHYLURIDINE MONOHYDRATE' 'Z.GALDECKI,B.LUCIAK,A.MALKIEWICZ,B.NAWROT 1991, MONATSH.CHEM., 122, 487' meurid all_ribose_gamma 1 7.50 0.006-0.010A '5-METHYLURIDINE HEMIHYDRATE' 'D.J.HUNT,E.SUBRAMANIAN 1969, ACTA CRYSTALLOGR.,SECT.B, 25, 2144' mxurid01 all_ribose_gamma 1 3.10 0.001-0.005A 5-METHOXYURIDINE 'G.I.BIRNBAUM,W.J.P.BLONSKI,F.E.HRUSKA 1983, CAN.J.CHEM., 61, 2299' pucglr10 all_ribose_gamma 1 4.60 0.006-0.010A N-6--(N-GLYCYLCARBONYL)ADENOSINE 'R.PARTHASARATHY,J.M.OHRT,G.B.CHHEDA 1977, BIOCHEMISTRY, 16, 4999' taljar all_ribose_gamma 1 3.60 0.001-0.005A '4-AMINO-5-METHYL-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE 5-METHYLCYTIDINE' ;N.PADMAJA,S.RAMAKUMAR,M.A.VISWAMITRA 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 1445 ; taljar all_ribose_gamma 2 3.60 0.001-0.005A '4-AMINO-5-METHYL-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE 5-METHYLCYTIDINE' ;N.PADMAJA,S.RAMAKUMAR,M.A.VISWAMITRA 1991, ACTA CRYSTALLOGR.,SECT.C (CR.STR.COMM.), 47, 1445 ; uroame all_ribose_gamma 1 4.00 0.006-0.010A 'URIDINE-5-OXYACETIC ACID METHYL ESTER MONOHYDRATE' 'K.MORIKAWA,K.TORII,Y.IITAKA,M.TSUBOI 1975, ACTA CRYSTALLOGR.,SECT.B, 31, 1004' . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . . PO4_1 . . . . . adypur10 ribose_C3endo_pyrimidine 1 5.70 0.006-0.010A . . adypur10 ribose_C3endo_pyrimidine 2 5.70 0.006-0.010A . . beurid10 ribose_C3endo_pyrimidine 1 3.30 0.001-0.005A . . beurid10 ribose_C3endo_pyrimidine 2 3.30 0.001-0.005A . . cupyuh ribose_C3endo_pyrimidine 1 3.40 0.001-0.005A . . cytidi01 ribose_C3endo_pyrimidine 1 2.87 0.001-0.005A . . cytidi02 ribose_C3endo_pyrimidine 1 5.40 0.001-0.005A . . jucjas ribose_C3endo_pyrimidine 1 6.53 0.006-0.010A . . meurid ribose_C3endo_pyrimidine 1 7.50 0.006-0.010A . . mxurid01 ribose_C3endo_pyrimidine 1 3.10 0.001-0.005A . . taljar ribose_C3endo_pyrimidine 1 3.60 0.001-0.005A . . taljar ribose_C3endo_pyrimidine 2 3.60 0.001-0.005A . . uroame ribose_C3endo_pyrimidine 1 4.00 0.006-0.010A . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C3endo_pyrimidine_anti . . . . . . C2endo_pyrimidine_syn . . . . . . C2endo_pyrimidine_syn . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_1 . . . . . . phosphate_O5_4 . . . . . #